Polyodon spathula (Mississippi paddlefish): 121329592
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Entry
121329592 CDS
T07273
Name
(RefSeq) tubby protein-like isoform X1
KO
K19600
tubby and related proteins
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121329592
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121329592
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121329592
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Other domain-containing proteins
Tubby family proteins
121329592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
Tub_N
Saf4_Yju2
Motif
Other DBs
NCBI-GeneID:
121329592
NCBI-ProteinID:
XP_041131184
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All DBs
Position
17:complement(6504115..6557967)
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AA seq
508 aa
AA seq
DB search
MDAVSSNRTMSYSRWSYDSVLDDEGSNLRQQKLDRQRALLEQKQKKKRQESLMVQSNVDS
RSRTRRMKQSEEQAPLVESYLSSNSSTIYHVQEAEQEDVKVVTDVQAPKSTKKSKAATTT
SQTSSTKKEKKGKHKGLDGPAAFQDVVQGLGSPIQILTVGQSSTDDGDGDMAASGQQQGK
HDLQVTMQKKGISSSMNFDEEEDDEEDEVSSSSSQLNSNTRPGSAASKKSNKEAASASTP
PASEPGVEVEVDDLEEFAVRPATQGVTIKCRITRDKKGMDRGMYPTYYLHLEREDGKKVF
LLAGRKRKKSKTSNYLISIDPTDLSRGGESFIGKLRSNLMGTKFTVYDNGVNPLKTTSSL
ETSELRQELAAICYETNVLGFKGPRKMSVIIPGMNMDHERVSIRPRNEHESLLARWQNKS
TESIIELHNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHDNDPDYIVMQFGRVAEDVF
TMDYNYPMCAIQAFAIALSSFDSKLACE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggtaagcagcaacaggactatgtcttacagcagatggagttatgacagcgtt
cttgacgatgagggcagtaatcttcggcagcagaagcttgacagacagcgtgccctgcta
gagcaaaagcagaagaagaagcggcaggagtccctgatggtccagtcaaacgtggatagc
cgctcacgaacacgcagaatgaagcagtccgaggagcaagcccctctcgtcgaatcttat
ctcagcagcaacagcagcaccatctatcatgtacaggaggctgaacaggaggatgtaaag
gtggtaactgatgtgcaggccccaaagtcaactaaaaaatcaaaggcagccaccacgacc
tcccaaactagcagcaccaaaaaggagaaaaagggcaaacacaaaggactcgatggccca
gctgcctttcaagatgtggtccagggcttgggaagtccgatccagattctcacagtagga
cagtccagcacagacgatggggatggagacatggcggctagtggccaacagcagggcaag
catgaccttcaagtcacaatgcagaaaaaagggatttccagcagtatgaactttgatgag
gaagaagatgatgaggaggatgaagttagctccagctcctcccagctaaacagcaacacc
aggccaggatctgcagccagcaaaaagtcaaacaaggaagcggcctctgcgtcgacgcct
cctgcgagcgagccaggggtggaggtggaagtagatgacctggaagagtttgctgtgagg
ccggctacccagggagttaccatcaagtgcagaatcaccagagacaagaaggggatggac
cgtgggatgtaccctacttactacctccatctagaaagggaggatggtaagaaggtgttc
ctattggctggaaggaaaaggaagaagagcaaaacctctaattacctcatctccatagac
cccactgatctgtctcgtggtggagagagcttcatcgggaagctgagatcaaacttaatg
gggaccaagtttactgtgtatgacaatggggtgaaccccctgaagaccacctctagcttg
gagacaagcgagctgcgtcaggaattagcagctatctgctatgaaacaaacgtattaggt
ttcaaagggccccgtaaaatgagtgtcattatacctggaatgaatatggaccatgaaaga
gtttcaatcagaccacgaaatgagcatgagtcattgctggcaagatggcagaacaaaagc
acagagagcatcattgagctgcacaataaaaccccggtgtggaacgatgacacccagtcc
tatgtcctgaatttccacggcagagtcacgcaggcgtcagtcaagaatttccagatcatc
cacgacaacgatcctgattacatagtgatgcagtttggtcgggtggctgaagatgttttc
acaatggactacaattaccccatgtgtgcgattcaggcctttgctatcgccctctctagc
tttgatagcaagctggcctgcgagtaa
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