Polyodon spathula (Mississippi paddlefish): 121329602
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Entry
121329602 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121329602
04082 Neuroactive ligand signaling
121329602
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121329602
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121329602
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF4979
CytochromB561_N
DUF7205
DUF5522
Motif
Other DBs
NCBI-GeneID:
121329602
NCBI-ProteinID:
XP_041131204
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Position
2:complement(7188150..7253784)
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AA seq
457 aa
AA seq
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MSAMRRKLQAFEYLCICLWLGMFWQARSGEANSLEDEAKNNITIFTRILDRLLDGYDNRL
RPGLGDRVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFNGPMNILRLNNLM
ASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDA
HACPLKFGSYAYTTSEVTYIWTRNATESVVVAEDGSRLNQYDLLGQTVGQETIKSSTGEY
TVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLS
ISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKKEK
ASVIKKNNAYAVAVANYAPNITKDSVLPTISKSATVDPNKAKPEAKPQEAKKTFNSVSKI
DRMSRILFPVLFGSFNLVYWATYLNREPAIKDLVPSK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctatgaggaggaaactacaggcttttgaatatttatgtatttgcctttggctg
gggatgttttggcaagcaagatcaggagaggccaactccctggaagatgaagccaaaaat
aacatcaccatctttacaagaattcttgacaggcttctggatggctatgataatcgactt
agacctggattaggagaccgagtaacagaagtgaagactgacatctatgttaccagtttc
ggacctgtttctgatacagatatggaatacacaatagatgttttcttccgacaaagctgg
aaagacgagcggttaaaatttaatggaccaatgaacatcctccggttaaacaacctgatg
gccagtaagatctggactcctgacacattctttcataatgggaaaaaatctgtggcccac
aacatgaccatgccaaataaactgctaagaatccaagacgatggaacgttgttgtacaca
atgagactgactgttcaggccgaatgcccgatgcatcttgaagattttccaatggatgcc
catgcttgcccattgaagtttggcagctatgcctacactacatcagaagtgacatatatt
tggacacgcaatgccactgaatcagtagtggttgcagaagatggttccagattgaatcag
tacgatttgctcgggcaaactgttggacaagaaactattaaatccagcacaggtgaatat
acagtcatgacagcacattttcacttgaaaaggaagattggctactttgtgattcagact
tacttgccatgcatcatgacagtcatcctgtcccaagtgtctttttggctgaacagagaa
tctgtccctgccaggactgtgtttggagtaacaactgtgctgacgatgacaactctgagt
atcagcgctcgcaattccctgcctaaagtggcttacgccacagccatggactggttcata
gctgtatgttatgcctttgtcttctctgcgttgatagaatttgccacagtgaattacttt
acaaagcgtggatgggcctgggatggtaaaagtgtagtgaatgataagaaaaaagaaaaa
gcctctgtcattaagaaaaacaatgcatatgcagtagctgttgctaactatgcaccaaat
atcaccaaggactctgtactgcccaccatttcaaaaagtgccacagtagatccgaacaag
gcaaagccagaagcaaaaccacaagaagccaagaagacgttcaacagtgtaagcaaaatc
gacaggatgtccagaatactgtttccagttttatttgggtcctttaacttggtatattgg
gccacatatttaaacagagaaccagccataaaagaccttgtaccatcaaagtag
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