Polyodon spathula (Mississippi paddlefish): 121329606
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Entry
121329606 CDS
T07273
Name
(RefSeq) anoctamin-5-like
KO
K19480
anoctamin-5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121329606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121329606
Ion channels [BR:
pspa04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
121329606
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Gene cluster
GFIT
Motif
Pfam:
Anoctamin
Anoct_dimer
TMIE
Motif
Other DBs
NCBI-GeneID:
121329606
NCBI-ProteinID:
XP_041131205
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All DBs
Position
17:complement(4285011..4309301)
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AA seq
910 aa
AA seq
DB search
MTETGSMKKLRENQKEPTLIEMSKTDESSGVEDNNGHDCLPNSATASPLPGVPELEKRPQ
SKDSIFFRDGVRRIDFVLSYVDEPTKEGEKKAERRKEFEINLQKAGLELETEDKSESEDR
QTYFLKIHCSWDVLTAYAEILKIKVPFKESDIPSNNETPLNWLLKPFRLPYEVMYPEPDY
FTSPFENKKPDFFLIKDKDAIFTPSTRNRIVYYILSRCPYATEEGKKKLGINQLLSNGSY
TAAFPLHDCQYWKKAKVQNCKSERFTLYRSWARFMCFYKEQPLNLIRKYYGEKIGIYFAW
LGFYTEMLFYAAVVGLICFCYGAFTYSGNVWSQEICSVDIGGEIVMCPLCDRRCGYWKLN
ITCDSSFQSHLFDNVGTLFFAMFMGIWVTMFLEFWKRRQAQLEYEWDLVDFEEEEEQQHL
QLRPEYETVCTRRRMNPVTQEMEPILPFTSKCARFCLSGATVVFWIALIIASIVGVIAYR
LAVYAALASIMKDNQDLQLVGSLITPQLATSVTASCLNFVVIMILNTLYERVAIWITDLE
IPRTHIQYENRLTTKMFLFQFVNYYSSCFYVAFFKGKFVGYPGSYTYMFGVLRNEECDPG
GCLIELTTQLIIVMAGKQIWGNIQEALVPWLQNWWRSRKARNQPESLYTRWEQDYDLQCL
GQLGLFYEYLEMVIQFGFITLFVASFPLAPLLALCNNIVEVRVDAWKFTTQFRRPVASKA
HSIGAWQEILHGVAVLSVVTNAFIVAFTSDMIPRLVYYYAYHPGTENSMEGYINNSLSIF
NISQFKPHNMPDDGESPSWFNSSIITTCRYSDYRYPPGHEKEYQHTMQFWHVLAAKMVFI
IIMEHVVFMVKFFVAWMIPDIPKDVKARVKREKYLTQEYLHNYEREMMKKQLEENCSAST
DRHELVSEGM
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgacagagacaggcagtatgaaaaaattaagggagaaccagaaagaaccaactttaata
gaaatgtccaagacggacgaatcaagtggagtagaagacaataatggacacgactgtcta
cccaactctgccacagcctctccccttcctggtgttcccgagctagagaaacggcctcag
agcaaagactcaattttcttcagggatggcgtccggaggattgactttgtcctctcgtac
gtcgacgaacccacgaaggagggagagaagaaagcggaaaggagaaaggaatttgaaatt
aatttgcagaaggccggtctggaactggaaacagaggataaaagtgagtctgaggacagg
cagacgtacttcctgaagatccactgttcatgggatgtgctgaccgcttacgcggagatc
ctgaagatcaaagtgcccttcaaagagagcgacatccccagcaacaacgagacgcccctg
aactggctgttgaagcccttcagactcccctatgaggtgatgtaccccgagccagactac
ttcacttcgcccttcgaaaataagaagccggacttcttcctcatcaaggacaaggatgcc
atcttcaccccctccacccgcaacaggattgtgtactacattctctcacggtgcccctac
gcgacagaggagggaaagaaaaagctgggaatcaaccagcttctgagcaacggctcctac
acggcagccttcccgcttcacgactgccagtactggaagaaagcaaaggtccagaactgt
aagagtgagaggttcaccctgtacaggtcatgggccaggttcatgtgcttttacaaggag
cagcccctgaatctcatcaggaagtactatggagagaagattgggatctactttgcctgg
ctgggtttctacacagagatgcttttctatgcggcggtcgttggtttaatctgtttttgc
tacggtgctttcacctacagtggtaatgtgtggagccaggaaatctgcagtgtggatatt
ggaggagagattgtcatgtgtcctctgtgtgaccggaggtgtggttattggaaactgaac
ataacctgcgactcctcctttcaatcccatctgtttgacaatgttggcacattattcttt
gccatgttcatgggcatatgggttaccatgttcctggagttctggaagcgccggcaggcc
cagctggagtacgagtgggacctagtggactttgaggaggaggaggagcagcagcatctc
cagcttcggcccgagtacgagaccgtgtgcaccaggcgcaggatgaacccggtcactcag
gaaatggagcccatcctgcccttcacaagcaagtgtgcacgtttctgtttgtctggagcc
accgtcgtgttttggatcgccctcatcatcgcctccatcgttggcgtgattgcgtaccgc
ctcgctgtttacgccgctctcgccagcataatgaaggataaccaggacctgcagctggtg
ggctccctgatcactccgcagctcgccacctccgtcacagcctcctgcctcaactttgtg
gtgatcatgatcctgaacaccctgtacgagcgagtggccatctggatcactgatctggaa
atccccaggactcacatacagtatgagaaccgtctgaccacgaagatgttccttttccag
ttcgtcaactactactcctcctgcttctatgtggccttcttcaagggcaagttcgtgggc
taccctggcagctacacctacatgtttggagtgctgagaaatgaggagtgtgaccccggc
ggctgtctcattgaactcaccactcagctaatcattgtcatggccggcaagcaaatctgg
ggcaacattcaggaagcccttgtgccgtggttgcaaaactggtggagaagccgcaaggca
cgcaatcaacctgagagcttgtacacccgctgggagcaggactacgacctgcagtgcctc
ggacagctggggctgttctacgagtacctggagatggtgatccagtttggattcatcacc
ctgttcgtggcctccttccctctggcccctctcctcgctctctgcaataacatcgtggaa
gtgcgtgtggacgcctggaagttcaccacccagttccgcagacctgtggcgtccaaggcc
cacagcatcggagcgtggcaggagatcctccacggagtagccgtcctttctgtcgtcacc
aacgcctttatcgtggcgttcacctcggacatgatcccccgtctggtctattactatgcc
taccaccctggcacggagaactccatggaggggtacatcaataacagcctgtctatcttc
aacatctcccagtttaagccccacaacatgccggatgacggagagagccccagctggttc
aacagctccatcatcaccacctgcaggtacagcgattaccgctatcctccggggcacgag
aaggagtaccagcacaccatgcagttctggcacgtcctggcggctaaaatggtcttcatt
atcatcatggagcacgtggtgttcatggtgaagttcttcgtggcctggatgatcccggac
atcccgaaagacgtgaaggcgcgggtgaagagggagaagtacctcacccaggagtacctg
cacaactacgagagagagatgatgaagaagcagctggaagagaattgctctgcctccacg
gaccgtcatgagttggtgtccgagggcatgtag
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