Polyodon spathula (Mississippi paddlefish): 121329611
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Entry
121329611 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121329611
04082 Neuroactive ligand signaling
121329611
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121329611
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121329611
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121329611
NCBI-ProteinID:
XP_041131215
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Position
2:complement(7358325..7384334)
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AA seq
555 aa
AA seq
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MVSAKKEMVIAMPSSYISTLIYFLYMTACIRKTSGQIKKDEKIYPENFTRILDRLLDGYD
SRLRPGFGGPVTVVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKYEGPIEILRLN
NLMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMKNGTILYTMRLTINAECPMRLMDFP
MDGHACPLKFGSYAYPKTEMIYTWKKGPENSVEVPQESSSLVQYDLIGQTVSSEIVKSIT
GEYIVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNTQIEKAKKKTGKSSP
APKASAGARANDTDEILQNPDTNGNLRKRMNYMTQPDANSGQRTDTGSDTKGGVIRQSLV
GQVPSAVAPSFSHSSPNPFSLVNVHPSVLTSGSTPPAPPSSPALPSHIPTNRIAGPASIQ
HLLGPKLEHIQATATKKKAHLKQASSTSASPAPPPGSGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTMEPES
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgattgcgatgccctccagttacatttccacacta
atttactttctctacatgacagcctgtataaggaaaacctcaggacagataaaaaaggat
gagaaaatatatccagaaaatttcacacgcatactggaccgacttctggatggttatgat
agcagactgcgacctggctttgggggtccagttactgtagtcaaaactgatatatatgtg
acaagctttggacccgtatcggatgttgaaatggaatatacgatggacgtcttctttcgt
caaacctgggtagacaagagactaaagtatgaaggccccattgaaatattaaggctaaac
aacctaatggtcacaaaagtgtggacgcctgatactttctttagaaatgggaaaaaatct
gtctcgcacaacatgacagccccaaacaagttatttcgaatcatgaaaaatgggacaatt
ttgtatacaatgaggcttaccataaatgcagagtgcccgatgagacttatggatttccca
atggatggacatgcttgtcctcttaagtttggaagctatgcatatccgaaaactgagatg
atttatacttggaaaaaagggccggaaaactcagtagaagtcccccaagagtcttccagt
ttggttcaatatgatctaattggacagacggtgtctagtgaaattgtcaagtctattaca
ggcgaatatattgtgatgacagttcatttccatttgaaacggaaaatgggctactttatg
attcagacgtatataccatgcattatgacagtaatcctctctcaagtatcattttggatt
aataaagaatccgtccctgctagaactgtatttgggataactacagttttgacaatgaca
acacttagcatcagtgcgaggcactccttacctaaagtctcatacgctacagcaatggac
tggttcatagctgtctgcttcgcctttgtgttttctgctctcattgagtttgctgctgtc
aactacttcacaaatactcaaatagaaaaggccaaaaagaagacagggaaatcttcgcct
gcgcctaaagcttccgcaggagcgagagcaaatgacacggatgaaatactccagaatcct
gatacaaatggaaacttgaggaaacgaatgaactacatgacacagccagatgccaacagt
ggccaaagaactgacactggaagcgatactaaaggtggtgttataagacaatctttagtt
ggccaagttccttctgcagttgccccatctttttctcactccagccctaatccattcagt
cttgtaaatgtacacccatcagttttaacatcaggaagcacacccccggcaccgccctca
tccccggccctgcccagtcacataccaacaaacagaattgctggaccagcttctattcag
cacctgcttggccccaagcttgaacatattcaagcaacagcaactaagaagaaagcacat
ctaaaacaagcctcctccacctctgcatcacctgctcctcctcctggctctggaacaagt
aaaattgacaagtacgcacgcattctgtttccagtttcatttggggcttttaacatggtt
tactgggtagtctacttatcaaaagacaccatggagcccgaaagttaa
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