Polyodon spathula (Mississippi paddlefish): 121329660
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Entry
121329660 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger FYVE domain-containing protein 26-like
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121329660
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121329660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZFYVE26
FYVE
ORC4_C
TPR_2
Motif
Other DBs
NCBI-GeneID:
121329660
NCBI-ProteinID:
XP_041131302
LinkDB
All DBs
Position
17:complement(18701495..18731823)
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AA seq
1894 aa
AA seq
DB search
MHQFGREEASSLEKLFVFFTQCLQRGEWALAQACVPQLGEWQGGGAGQVQEILQAILACP
YQLRWDTVGSPHLLAWQWLQVLEKWSQEQIPVFVKSELEFMLLLEELQTEASENVLKEFY
QAFLHSHSPNITKEKKREPQSAQLSAEAVSCLWDMLSEKPRLAQALTGYLLAHDCDSSSL
HKLFIDFLQEAVCGLRGGAGSRAVEQVYSGLSVLHCNPEWPAGELRQLCEALFESSWGEA
APLREERVLSCLLRPHAHALISLYSSVAMERTKEKLLEHKPQEQVSAKLSEAEKVTALSL
MKREDVSSLHSLLNEEFRPLSRLLLLLGCTHCQSLESAKTFLRTLHENRELHCDFVLKEF
GDGLSTQVKILEWCSENNRNRIPSPDLLRHLHSVDCHSALYILHSLTTLPALDEERVLQL
LQGLPATHSNGQQIHRNAFSWGGSLGSPSYAWLFSIHWGGQSSLYIYTRLSDPAGFMETS
TLVRRRNVVLFQGFCAMKYAVYALCVNADKHSACKDCLSSLAEEQPESREEPGKDQSSSP
VYPELFKKYMSKCQQYLQAVPVVFRLELLENIYSLLFTSRSDLSSEKVEESALEENDEVV
EEGEGEGEGETERNSEVRSLNSSLEHSDYPETGQQDGGESSQPQRSTHLKDTESQTFRHL
KHFANGAGGFMADEAALEAFLKLLKEHLDGIDRDVLWESKHAPDTEKELAECLNCSISAD
TFNARLQRLSKYISETQWRFQVVTSNKTAEGQISATRKLHPVTLRRSSFKRRRRAARSRA
GEESVWSSREDRILIFINSRADHTEPPLARQAPWSVCSIFADNLLAALGEILKVLKEVEG
MKHLFLVKDADLRARLVLHCLEKWPLGACLEIVMFCVSDSEKTEELKENLLLKKQELQIY
QQILDLSSPSRWSNWQEVRRDSREEFGLCDRXVEQHPVSPECMMRLQREHLLHLLETGDS
EDAFQLLQSLSDPELCLLISEQALDQCPGLTACHFLANYLTSHIHKSVAPTRQHQIQAMH
IGSELLLTLPEPARQHYFQLSSSPLLMLEQLLMNMKVDWAAVLSLQQLLLGQEAGFTAED
INELLTRYARKALDFPYAHLERTRAEDKSTGPPDLDSRTGDLPSLFSAETTPSSTAGSSP
LHTPKAPPERAQCRQKLEFTPPERPPEKNNWIPDQQQDVCMVCRKERFTMFNRRHHCRRC
VRLVCNTCSTRKMGVQSCREDPVLVCDQCYSFYTKSKCSGILSEGMTGKADSHTGAASLQ
LSSNYSIKEHEQAEVADSLGSGCLGFSVILQLPEVPGRLRKLSLNEAENEIEHSEFYYEQ
RPRLLTDIMKQLLFSAKLMFVKAGRSQDLALCDSYISKVDVLKILVSANYKYVPSLDQIL
QPAAVSRLRNQLLQTEYYQLAVEVSTKSGLDPGGXWHAWGMACLKAGNLIAARENFRRCL
KALFDPNQQNYGPQLLQDIIQHLESTVKPSLSLNDDILATLKQLEDALMETTPPDRPEGK
IQQNSCYQECLYYLHTYRTNLAIISFYMRHDCMRDALIHLLNKETPEDVFLEGIFVPSYE
SGKLHVLENLMETIDSGLESWSGYLIASCKHLQKRGFFNILYDLQQFMKDHVRAAMTCIR
FFTHKAESYVDLGGKQKWLIKAKDHLKTYLQEHSSRNSGRRKSASSFRKKMYSSDVSRHI
NTIELQIEVTRFLHRCESSGTSCSIAFPPANLFGNRSMKMDVACKVMLGGKNIEEGFGIA
FGIIQDFLLDAAAVYNRAVKRLVKYRQYREIRQLLKCVSESGAATKNDCDNIILSCIEAA
DKVPSEAKELDSLILEMKSTDNKIKAYLLCSKLRSAYLIAVKLELPRASQLVQEVLGAAE
QARDLIMQDICTQWQSEHQGRSSTVPRQGAATRR
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagtttggcagagaggaggcaagctcgctggagaagctgtttgtgttcttcaca
cagtgcttgcagcggggggagtgggctcttgcccaggcctgcgtgccccagctcggagag
tggcagggagggggcgcggggcaggtgcaggagatcctgcaggctatcctagcctgccca
taccagctgagatgggacacagttggtagccctcatctccttgcttggcagtggcttcag
gtactagagaagtggtctcaagagcagatcccagtatttgtcaagagtgagctggagttc
atgttacttctggaggagctgcagactgaagcttcagaaaatgtgctcaaggagttctat
caagccttcttacacagccacagcccaaacattaccaaagaaaagaaaagggaaccgcag
agcgcgcagctcagtgcggaggcagtgtcgtgcttgtgggacatgttgtcagaaaagccc
agactggcccaggcgctgacggggtacctgctggcacatgactgcgacagcagctctctg
cacaagctgttcattgacttcctgcaggaggcagtgtgtgggctgcggggtggcgctggc
agccgcgctgtggagcaggtgtactcagggctgtcggtcctgcattgtaaccccgagtgg
ccagccggagagctgaggcagctgtgtgaggcgctcttcgagtccagctggggggaggcg
gcccctctcagagaggagagagtgctgagctgcctgctgcggccacacgctcacgctctg
attagcctgtacagcagcgtcgccatggaaaggacgaaggaaaagctgttggaacacaag
ccacaggagcaagtgtctgccaagctgtctgaagcagagaaggttacagccctgagtttg
atgaaaagggaagatgtttccagtctacacagtctcctgaatgaggagtttaggcctctt
tctaggctgctgctattgctgggttgcactcactgccagagtttggaatcagcaaagacc
ttcctgcgcactctccacgagaacagggagctgcactgtgattttgtactgaaggagttt
ggggatggcctatccacgcaggttaaaatacttgaatggtgctctgaaaacaacaggaac
agaattcccagtccagatctgctgaggcacctgcacagtgtggactgccactcggctctg
tatatcctgcactccctcaccaccctgcctgcgctggacgaggagagggtgctccaactg
ctgcaggggctgccagctacacacagcaacggtcagcagattcacagaaacgctttcagc
tgggggggctcactcgggtctccgtcctacgcttggctgttctctatacactggggtggc
cagagttccctgtatatctacacacgcctctcagatcctgcagggtttatggagacctct
acccttgttaggcgtaggaatgtggttctgttccaagggttctgtgccatgaaatatgct
gtctacgcactgtgtgtcaacgcagacaaacactctgcatgcaaggactgcctgagcagc
ttggcagaggagcagccagagtccagagaggagcctggcaaagaccagagttccagtcca
gtgtaccctgaactttttaagaaatacatgagtaaatgccagcagtatttacaagccgtg
cctgtcgttttccgtctggagctgctggagaacatttattccttgcttttcacatcacgc
tccgacttaagctcagagaaagtagaggagtctgccctggaagagaatgacgaggttgtg
gaggagggggagggggagggagagggggagacagagaggaactctgaggtgcggagcctc
aacagcagcctggagcacagcgattacccagagacagggcaacaggatgggggagagagc
agccaaccacagagaagcactcaccttaaagacactgaatcccagaccttcagacacttg
aagcactttgctaatggggccggcgggttcatggcagacgaggcggcactggaagcgttc
ctgaagctgctgaaagagcacctggacgggatcgacagggacgtgctgtgggagagtaag
catgcgccggacacagagaaggaactagctgagtgcctgaactgttccatcagcgccgac
accttcaacgcgcgcttacagcggctttccaagtacatctccgaaacccagtggaggttc
caggtggttaccagcaacaagactgcagaagggcagatttctgccacaagaaaactgcac
cctgttactctgagacgctccagcttcaagaggagaagacgggcagcaagaagcagagct
ggtgaggagtctgtgtggtccagcagggaggacagaatcctgatttttatcaacagcagg
gctgaccatacagagcccccactagcccggcaggctccttggtcagtttgctccattttc
gctgataacctgctggcagcacttggtgaaatattaaaggttctgaaagaggtggaaggc
atgaagcacctgttcctggtgaaggacgctgatctccgggccaggctggtgctgcactgc
ttggagaagtggcccctgggagcctgcctggagatcgtcatgttctgcgtaagtgactca
gagaagacggaggagctgaaggagaacctgctcttgaagaaacaggagctgcagatttac
caacagatcttggatctgagttctccctccaggtggagcaactggcaggaagtgcggaga
gattcccgagaggagtttggtctgtgtgacaggtgagtggagcagcaccctgtctctcca
gagtgtatgatgaggctgcagagagagcacctgcttcacctgctggagaccggggattcg
gaggacgccttccagttgctccagagcctgtcggacccggaactgtgcctgctgatcagt
gagcaggccctggaccaatgcccggggctgacggcctgccacttcctggctaattatctc
acctcacacatccacaagagcgtggccccaacgcgccagcaccagatacaggccatgcac
ataggctcagagttgttgctgacgctaccagagcccgctcgccagcattactttcagctg
tcatccagcccactgctgatgctggagcagctcctgatgaacatgaaggtggactgggcg
gccgtgctctccctgcagcagctcctcctggggcaggaggccggcttcacagccgaggac
atcaacgagctgctcaccagatatgccaggaaggctctagatttcccctacgcacacctg
gagagaaccagagcagaagataagtctacaggacctcctgatctagactccaggacagga
gaccttccctccttgttctctgcagaaacaaccccctcttccactgctggcagcagcccg
ctacacacacccaaagccccccccgagagagcccagtgcaggcagaaattagagttcact
ccccctgagagaccaccggagaagaacaactggattccagaccagcagcaggatgtgtgc
atggtgtgcaggaaggaacgcttcaccatgtttaacaggcggcaccactgcaggcgctgt
gtccggctggtctgcaacacctgctccactaggaagatgggtgtgcagagctgcagagag
gatccagtgctagtgtgtgaccagtgttacagcttttacaccaagagtaagtgctctggc
attctcagtgagggaatgacggggaaagctgattctcacactggagctgcatctttacaa
ctttcctctaattacagcataaaagagcacgagcaagcagaagtggctgacagccttggc
agtggctgtttgggtttttctgtcatattgcagttaccagaagtgccggggaggctgcgc
aaactctcactgaatgaagcagaaaatgagattgagcacagcgagttctactacgagcag
cgtccccggctgctcaccgacatcatgaagcagctgctcttcagtgccaagctgatgttc
gtcaaggcggggcgcagccaggacctggccctgtgcgacagttacatcagcaaggtagac
gtgctgaagattttagtctctgccaactacaagtacgtgccatcactggatcagatcctg
cagcctgcagccgtgtccagactgaggaaccagctgctgcagacagagtattaccagctg
gctgtggaggtctccactaagagtggtctggaccctggtgggntgtggcatgcctggggg
atggcctgcctgaaagcagggaacctgattgcagcgcgagagaatttcagaaggtgtctg
aaagctctgttcgacccgaaccagcagaattacgggccccagctcctgcaggatatcatc
cagcacctggagtccactgtcaaacccagcttatccctgaacgatgatatcctggccacc
ctgaagcaactggaggatgctctgatggaaactacccctcctgacagaccagaagggaag
atacagcagaacagctgctaccaggagtgcctctactacctgcacacgtacaggaccaac
ctggccatcatcagcttctacatgaggcatgactgcatgagggacgcgctgatacacctt
ctcaacaaggaaaccccggaggatgtgttcctggaggggatcttcgttccgagctatgaa
agtgggaagctgcacgttctggagaacctgatggagaccattgactcggggctggagagc
tggagtgggtacctgatcgcatcctgcaaacacctgcagaaacgaggctttttcaacatc
ctctatgacctgcagcagttcatgaaggaccacgtgcgggcagctatgacttgtatccgg
ttcttcactcacaaggcagaatcgtacgtggacctgggggggaagcagaagtggctgatc
aaggcgaaggaccacctgaagacctaccttcaggagcactcaagccgcaactccgggagg
aggaagtctgccagctccttcaggaagaagatgtactccagcgatgtgtccaggcacatc
aacacaatcgagctgcagattgaagtgaccaggttcctgcatcgctgtgagagctctggc
acctcatgcagcatagccttcccacctgccaacctgtttggaaacagaagcatgaagatg
gacgtggcctgcaaggtcatgcttggcggtaagaacattgaggaggggtttggaattgcc
ttcgggattatacaggacttcctgctggacgcagcagcggtgtacaacagggcagtgaag
cggctggtaaagtacaggcagtatcgggagatcaggcagctgcttaagtgtgtcagcgag
tcgggagccgccaccaagaacgactgtgataacatcatcctgagctgcatcgaggcagct
gacaaggtgccctccgaggctaaggaacttgacagtttgattttggaaatgaaaagcaca
gataacaagatcaaggcctacctgctgtgcagtaagctgcgctcggcctacctgatcgcg
gtaaagctggagctgcctcgggcctcccagctggtgcaggaagtgctgggggctgcagag
caggccagggacctcatcatgcaggacatctgcacacagtggcagtccgagcaccagggc
aggagcagcacggttccccggcagggcgcagccacacgcagatag
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