Polyodon spathula (Mississippi paddlefish): 121329666
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Entry
121329666 CDS
T07273
Name
(RefSeq) 5'-3' exonuclease PLD4-like
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00564
Glycerophospholipid metabolism
pspa00565
Ether lipid metabolism
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121329666
00565 Ether lipid metabolism
121329666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121329666
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
121329666
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121329666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Motif
Other DBs
NCBI-GeneID:
121329666
NCBI-ProteinID:
XP_041131307
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All DBs
Position
17:22891214..22903245
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AA seq
578 aa
AA seq
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MFLQSEKPKEEPVPAVPLRVSPRHSVLRNNTSGEAVLPTTKLLSEDNCAVDGEEHLKTIT
MESTTKKVSSTTRSIPYKGLNNTNTTISHRCSKALVLLGLTAGCLALLAAIVSVWSEITS
CEACSTEVGLTDLLEKDEVLPDSETNLEDDNVCNESSSFILTESIPVDVQYGENATVHKP
LYEAWTELLSVASKSVHVASFYWSLTGEDIDVNTSSDVHGEHILQQFVDMHSRNVSVFVA
SSIPSLSSNSTDLKLLQKKGARVRKVNFGHLTQGVLHTKLWIVDMKHIYIGSANMDWRSL
TQVKELGAVIYNCSCLAKDLYKIFQSYWDLGYRNATVPQPWPQQYSTSFNKDNPLLLNIN
GAPARVYISGSPPTFCPSGRTKDLDAIVSAINEADKFINVAVMEYFPTSRFRRPHKYWPA
LDNALRRSAFERHVQIRLLISCWQHSDPAMFPYLKSLSAVSYPPLNISIEVKLYIVPVGN
HTDIPFARVNHNKYMVTDKLAYIGTSNWSEDYFNTTAGVGLVITQTQQSSNSTGQTVQEQ
LKGVFDRDWNSKYAINLDELEHHPHCAFSEKARPARGV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtttttacagagcgagaagccaaaagaggaaccagttccagctgtacctttgagagtt
tcaccacgtcacagcgtcctcagaaacaacacgtctggggaggcagtgctaccaacgaca
aaactgctttctgaagacaactgtgcagtcgatggagaagagcacctcaagactatcaca
atggaaagtacaactaaaaaagtgtcaagtacaacaaggtccattccttataagggttta
aataacaccaatacaactatcagccacaggtgttccaaagctcttgtgctgttgggactc
acagcaggctgtctggctttgttggcagccattgtttcagtctggagtgagatcacaagc
tgtgaagcatgttcaactgaagtgggactcactgatctccttgagaaagacgaggtcctg
cctgacagtgaaacgaacctggaagacgataatgtttgcaatgaatccagcagttttatt
ctcactgaaagcattcctgtggatgtgcagtatggtgagaatgctactgttcataagccg
ctgtatgaggcctggactgagcttcttagtgtggccagcaagagcgtccacgtggcctct
ttttactggtctcttactggagaggatatcgacgtgaacacctcttctgacgtccatggt
gaacacatcctgcagcagtttgtggacatgcattcaaggaatgtgtctgtgtttgtggct
tccagtattccgtcactgtcaagtaactcaacagacctgaagcttctgcagaagaaaggt
gctcgtgttagaaaagtgaattttggccatttgacacagggtgttcttcacacaaagttg
tggattgttgacatgaaacacatatacattggaagtgctaatatggactggagatctttg
actcaggtcaaagagctgggtgctgtgatttacaactgctcctgtctggcaaaggacttg
tacaagatatttcaatcttactgggaccttgggtaccgcaacgccactgtccctcagccc
tggccacagcagtactccacctccttcaacaaagacaaccctctcctgctgaacataaac
ggggcccctgccagggtctatatctctgggtcaccccctactttctgccccagtggtaga
actaaagacctggatgctatcgtctctgcaatcaatgaggctgacaagttcatcaatgtg
gcggtgatggaatatttccccaccagccgtttcagaaggccgcacaagtactggccagcc
cttgataatgcattgaggagatcggctttcgagcgtcatgttcagatccgcctcctgatc
agctgctggcagcacagtgaccctgccatgtttccatatctgaagtcactcagtgctgtt
agttatccgcctttgaacatcagcattgaagttaaactctacattgttcctgttgggaac
catacagacattccttttgctagagtgaaccacaacaagtacatggttactgataaactt
gcatacattggcacttccaactggtcagaggactacttcaacaccacagccggggtgggg
ctggttatcacccagacacagcagagctccaacagcaccggacagacagtccaggagcag
ctcaagggggtgtttgatagagactggaattcaaaatatgccataaacttggatgagttg
gagcaccacccccactgtgcattctctgagaaagctaggcctgcccgtggtgtgtga
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