Polyodon spathula (Mississippi paddlefish): 121329676
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Entry
121329676 CDS
T07273
Symbol
ttc6
Name
(RefSeq) uncharacterized protein ttc6
KO
K24929
tetratricopeptide repeat protein 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121329676 (ttc6)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
121329676 (ttc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_9
TPR_16
TPR_17
TPR_12
TPR_14
TPR_19
TPR_CcmH_CycH
ARM_TT21_N
ANAPC3
ARM_TT21_2nd
NatA_aux_su
ARM_TT21
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
121329676
NCBI-ProteinID:
XP_041131317
LinkDB
All DBs
Position
17:complement(28671448..28701389)
Genome browser
AA seq
1494 aa
AA seq
DB search
MRKKQILSERKIPEQQVSFLATWTPSNNKSQKYKTIHHLCTTSSTHILTQDLQRASRLFL
MPNIIPAADQVIHQVAALSHYETTEKNRIVGGAPFLDVYQGEKEGGVRHLETHSKDHLAE
WQQIAEYYVERPRMQLLGKQAAKYMNASKMFWKPAPPKFTFATSFVQDKIFPKYQETKHS
VAGEELYCDLQNLNESEYVDVDAERRAIMPKVLSRKHKSMLELRSTEDLSLQMFTETSVK
SCLIRKSISAPNLSTETKTELKFPADFKTLSNELELAKQQQLSQTKAQAKIEVFSSSTNP
LMETPTAQFAQLENPEQISKHSPVLQPQIKGKMSKVEAARNAGMKYIVHPKKKKTTKGKK
KLSPQKLAFVLDKLNQPARTLTRCKSLLRLPRTIEPSLRVPEKSRHYRSSSLPLMLNFEK
FTEDHGSIPESVHVREWVRDIWNSWFDEVFPPPENVKVSAAKTTKLPYTETKKIVEKPQP
DEEMSVPDQIDLSLALGPSISTADLQNEIDKITQCLAEEGRSSAFNFCRRGALYKKMGNL
KLALEDLNKSISIEPGLLDAYWHRHCISLLKGNQKHALDDLNFIIKHNKNHADAYMSKAE
IYRSKGDITMSIVNYTRAIKARPEDDETYFRRAQMFEMSNEKSLAIDDYAKASAINPKRT
DALMIHGLHFFKNLNWSVAIQDFTAVMKHEPLNAKARTYRGRAYAKLGHYQQAVEDLSAA
VHLDPNNWIAFYHRGCLLRKSHSEIALRDLSVSVLINDSVDNLNAFLHRGILYTELNQWI
QAICDFEHVLKLDRYVAVAHINLGLIFMLKMENHYEAIRRFTSAIKIDPTCNRAYVCRAE
AYHKVHDLQRALKDVTQAIHLQPDTQHLYIMRGEYLCKMKKFELASFCIHYAAEMNKALG
SSPIQQAAVQSFLGNNSKAIDCLVSATKTCPTPSVIILLGKTQMKAKKYKEAVKSFKTAL
DLLSPKEGVTSTAPEAAEIFHLIGLCYMAQFNLLQALEAFTSAVKINPEHADAFYQRGLC
KMRLQQATSVHDFNRALATNPNLFQVYLSRAAFYGEKCRYSKAILNCNEAIKIHPKSVRA
YLYRGALKFYMRVYKNALEDLTTAINLDNMCTLAYYNRGVCYQQTEQYEKALKDYGIVLL
LGSRQEVDLKVLINRGLLYAKLSDHHNALLDFKAATMANPLDPAIFNALGICHHRLGQLA
EAIDAFNQAIKLKPFFLDAYVGRGNVYMDYGHEAATKQAQRDFLTALHLNPACSKARINL
GYNLQVFGNFKKAWNQFTIIADIYPTCSTAYEGRSVVNLQMGNTFAAFQDVNTALKLNKA
SDQLITNRGVINQFMGDHSNAMKDYQRAITINPHNALAYFNAANIYFYNRQFEQASEYYT
KAFDLDPSNESSVLNRAITRTLLRNVQGALEDFKEALNLSPFSAQIYFNRANLYISVKQY
QLAENDLSRALLLQPHDALVYKLRADVRGQLGLTEQAILDYKQAVELQESAQAL
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaagcaaattctatcagagagaaagataccagagcagcaagtttctttcctg
gcaacatggaccccatcaaacaacaaatctcagaagtataaaacaatccatcacctgtgt
actacttcatctactcatatcctgacccaggatttacagcgagcatcacgcttatttctc
atgcccaacataatacctgctgcagatcaggtgatccaccaagtggcagcattgagtcac
tatgagactactgaaaaaaacagaattgtaggaggagccccctttttagatgtatatcaa
ggagaaaaagagggtggtgttaggcatctggaaacacattccaaagaccatttggctgaa
tggcaacagatagcagagtattatgtggagagacctagaatgcaacttttggggaaacag
gctgccaagtacatgaatgcttcaaaaatgttttggaaaccagcacctcctaaatttaca
tttgcgacttcatttgtgcaagacaaaatatttcccaagtaccaggaaactaagcacagt
gtggcaggcgaagaactgtactgtgacctgcaaaacctgaatgagtcagaatatgttgat
gtggatgctgaacgtagagctataatgccaaaggttttatcaagaaaacacaaatctatg
ttagaactaaggtcgacagaagatctttctctgcagatgtttacagagaccagtgtaaag
tcttgtttaattaggaaatcaatatcagctccaaacctgtccacagagaccaaaaccgaa
ttaaagtttcctgctgatttcaaaaccttatcaaatgagttggaacttgcaaagcagcaa
cagctatctcaaacaaaggctcaggcaaagatagaagtcttctcttcttcaactaatccc
ttaatggaaacccctacagcacaatttgcccaacttgagaatccagagcaaatcagtaaa
cacagccctgtcctgcaaccacagatcaagggcaaaatgtccaaggttgaggctgcacgg
aacgctggcatgaaatacattgtacatccaaaaaagaagaaaaccacaaaggggaagaaa
aagcttagcccccaaaagctagcttttgtacttgataaactaaatcagcctgcaaggaca
cttacaagatgcaagtctttgcttcgactgcctagaacaattgaaccctctctaagagta
cctgaaaagagccgccattatcgaagctcaagcctgcctttgatgctgaactttgaaaag
tttactgaagatcatggtagcatccctgagagtgtccatgtcagagagtgggtgagggat
atctggaacagttggtttgatgaagtcttccccccacccgaaaatgtaaaagtatctgct
gctaaaacaacaaagctgccttatactgagacaaagaaaattgtggagaaaccacagcca
gatgaggaaatgtcagtgccagatcaaatagatctctcccttgctcttggaccatcaatt
agtactgctgatttgcagaatgaaattgacaagattacacagtgtctagctgaagaggga
cgttccagtgcctttaatttctgcagacgaggagctctttataaaaagatgggtaatcta
aaactggctttagaagatctgaacaaaagcataagcattgagccaggtctactggatgca
tattggcacaggcattgtatctctttgctgaaaggaaatcaaaaacatgcattagatgac
ctgaatttcataattaaacacaataaaaaccatgcagatgcctatatgtcaaaagctgaa
atttacagaagcaaaggagatattaccatgtcaatagtaaattacactcgggcgattaag
gccagacctgaagacgatgagacctatttcaggagggcacaaatgtttgaaatgagcaat
gaaaagtcattagcaattgatgattatgctaaggccagtgctattaatccaaaaagaaca
gatgctttgatgattcatggcctgcacttctttaagaatttaaattggagtgtagctatt
caggacttcacagcagtaatgaaacatgaacctctaaatgccaaagctaggacttacaga
ggaagagcatatgctaagctaggacattaccagcaagcagtagaagatttatcagcagca
gtccatttggatcccaacaactggatagctttttaccacagaggttgtttactgaggaaa
agtcacagtgaaatcgctttgcgggacctaagtgtttcagttctcatcaatgacagcgtt
gataacctcaatgcctttttacaccgtggaatcctctatacagaactaaaccagtggata
caagctatctgtgacttcgagcatgtactgaaacttgacagatatgttgctgtcgctcac
ataaacctagggcttatttttatgctaaaaatggaaaatcattatgaagccattcgcaga
tttactagcgccataaagattgatcctacctgcaacagagcatatgtttgtcgcgccgaa
gcttatcacaaggtacatgatttacagagggcactgaaagacgtaactcaagctatccat
ctacaacctgatactcagcacttatacataatgagaggagagtacttgtgtaagatgaag
aaatttgagcttgcaagcttctgtatccattatgcagctgaaatgaataaagctctaggt
tcttctccgatccagcaagctgctgtccagtcttttctagggaacaactcaaaagccatt
gattgccttgtttcagccacaaaaacctgtcccacaccatctgtaatcattcttctggga
aaaacacaaatgaaagccaagaaatacaaggaagctgtgaaaagcttcaaaacagcactg
gatctgttgagtccaaaggaaggagttacatcaactgcacccgaagctgcagaaatcttt
catttaataggcctttgctacatggcacaattcaatttattacaggctttggaagctttc
acaagtgctgtgaagataaatcctgagcatgcagatgcattctaccagcgtggactgtgt
aagatgcgtcttcaacaggccacaagtgtccatgactttaatcgagcacttgccaccaat
ccaaacctctttcaagtatacctaagccgtgctgctttctatggcgaaaaatgtcgctac
tcaaaggctattcttaactgcaatgaagctatcaaaattcacccgaagagtgtgagagca
tatctttacagaggtgctttaaagttctacatgagggtatataagaatgcgttggaagac
ctaaccacagctatcaaccttgacaacatgtgcactttggcgtattacaatagaggagtg
tgctatcagcaaacagagcagtatgaaaaagctttaaaagactatggaattgtgctgctt
cttggaagcagacaagaagttgatcttaaagtgctaattaatcgtggactgctgtatgca
aagctcagtgaccatcataatgcactgctggatttcaaggctgccaccatggcaaaccct
ttagacccagcaatcttcaatgcccttgggatctgccatcacagacttggacaacttgca
gaagcaattgatgcctttaaccaagcaattaaactaaagccatttttcctggatgcatat
gtgggacgtgggaatgtatacatggattacggccacgaagcagcaaccaaacaagcacag
agagatttccttacagcactgcacttaaaccctgcatgttcaaaagccagaatcaacctt
ggttacaacttacaggtttttggaaacttcaagaaagcctggaatcagtttacaatcata
gctgatatatatccgacatgcagtactgcttatgagggacgatctgttgtcaaccttcaa
atgggcaacacatttgctgcatttcaagatgtaaatacggctttgaagcttaacaaagca
tctgatcagctgattacaaaccgtggcgtcataaaccagttcatgggagaccattccaat
gcaatgaaggactaccagagagcaattacaattaaccctcataatgcattggcttatttc
aatgctgccaacatctacttctacaataggcaatttgaacaggccagtgagtactatact
aaggcatttgaccttgatccaagtaacgagtcctctgttctgaatcgagcaattacccgg
acattgcttcgaaatgtgcaaggagctctggaggattttaaagaagccttgaatctcagc
ccattctctgctcaaatatattttaacagggcaaacctttacatatctgtgaagcagtac
caattggctgagaatgacctctctcgagcactcctgcttcagccccatgatgcactggtg
tataaactcagagctgatgtacgaggtcagcttggtttaacagaacaagctattttggat
tacaagcaagcagtagaacttcaggaatctgcccaagctctataa
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integrated database retrieval system
