Polyodon spathula (Mississippi paddlefish): 121329771
Help
Entry
121329771 CDS
T07273
Name
(RefSeq) centrosomal protein of 170 kDa protein B-like isoform X1
KO
K16463
centrosomal protein CEP170
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121329771
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121329771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP170_C
FHA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
121329771
NCBI-ProteinID:
XP_041131481
LinkDB
All DBs
Position
17:22823847..22876640
Genome browser
AA seq
1673 aa
AA seq
DB search
MSVTSWFLVSSSGTRHRLPREMIFVGREDCELMLQSRSVDKQHAVINYDLATDEHLVKDL
GSLNGTFVNDLRIPDQTYITLKLNDVIRFGYDAHVYVLERSQHRVPEEALKHEKYTSQLH
MNIKAPDGKKAEQTDETESGAESPRAKLEKGDPKGLPETTTSRPTPLYGQPSWWGEDDAG
NKVPPTEGTRPEEIHSEGPKETARHDLEINGTIADYRDSPGKSIYAYRREPSYFEIPTKE
FQQHHKSPEAEVHEIPTKDTDNAPSPVPATTPPVVQSHASFTIEFDNCTPGKIKIRDHVT
KFSMRQRQFGKDLAAAPTEVMSAESKVADWLVHNDPSLMRRKPPCDDVYSTKSDLPVYIK
TLQVNRHEDGTQSDSEDPILSEKPNKQTTPEEEPLNSPPESHSSLQSQTKLETQESLNQQ
AFVIEFFDNPRKKRSQSFTHNSVNGDSYSALKAKLEKRKVATASTQHTSGPVKSAAGPQR
SSSLKREKTEDRLSSGSSLFSSRTPVTVKPFGSVGKKSKLAQDFAAELLKAQSVTTLAVA
TPASEKPIPQPVSAPPVMESAPPQLPTPPPAQPVSPFLTVAPLAAPLAFPLAVRSLDMKP
GKLGRNEEDDSLSDAGTYTIETETQDKEVEEARNMIDQVFGVLESPEYTGVYRPVINDDR
EEHNSCRHSKSSTVDQKETPLQGYNPAVVSGPQIEGTGQARHVGPVPPGGPKWVSRWASL
ADSYGNSGPTSGLHDLQQHGDVTDGGRRIGHPPIMSRTAEHTESDSTQSARTRRLLPQVP
PAEKSESPTPSIVIRPDPYPSYGVPERGSGTPRQQESAQRLCVQDDLDPDSLSDASKSDD
GSAVQKNKKHRTGRGIDKTKPEKLWTDNTNVQRLEEKPAVTGTRATSFYIGSKETPSKQT
SGHGHTVSRADSEPEISSKPASSTVLGKHLAKLDAKETGKQSVLVQKICLQEKEAVTPKE
SSTSFVRQESFTKDRPSDDVPINKLPHISSHPALKDLDVRHAYGTDCSQDTQLFLKDTEN
ALAALEAKFHSHGPHRCQKSETSITQMEDSLSGESDVDTASTVSHVSSKKNTVSAVPQKR
YINSLQKEKSSSTPSIQDQYGPTSARERLSEKRRTQMSEGGTKADSTKRFQLRRSTGNRG
SLDFTEDVRSTSLPYWPDSFSSDHESSSRPTMRKKLIAQPQKEDPSKVPKSVVYQALTRS
NSLSAPRPTRASMLRRARLGEASDNESTETDRVSLNSDASGPSKPPTDSKKLSRLDLLAM
PRKRTGSFTMPSDTETSTSRSGFSNRSMEFSSSIRKSVAAEAKPTAKRTPGAGVKQPVSR
GRSSSARYSSATSSSRRRQKGSDYISTSDEEYESSHTSPKHKRSHASTATQTSRAQAAER
RKVQSRETEEEEEDEEADPYQHWSSHSAEIAKLSQDLAKDLAILAREIHDVAGDGDSQSS
SGTGPSTSLSSVPNTPASTMSAREENALPSPQATLSSQLVQHIPEASLNFQKVPPGSTGL
KKELDQNMNDRDLKRRSWSREEVILDNLMLNPVSQLSQAIRENTEQLAEKMKILFQNRTG
NWQDIEAKMYSENEVPILKTSNKEIMSILKELRRVQKQLEVINTIIDPSGNPDLGSRAFS
IGAPPASARGRTGPSGSSPRDSKSPAQRGSCQSSNANTRGKREACAEEESYIV
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgacgtcatggttcctggtcagcagctctggcacccggcaccgtctccctcga
gagatgatcttcgtgggccgggaggactgtgaactcatgctgcagtcccgcagcgtcgac
aagcagcatgcggtaatcaactacgacttggccacagacgagcatcttgtgaaggacctg
ggaagtctgaatgggacctttgtgaatgatttaagaattccagaccagacctacataacc
ctaaaactgaacgatgtgatacggtttggatatgatgcacatgtttatgtgctggaaagg
agtcaacacagagtacctgaagaggcgttaaagcacgagaagtacacaagccagcttcat
atgaacatcaaggcgccagatgggaagaaagcagaacagactgatgaaacggagagcggg
gcagagtcccccagggctaaactggagaagggagaccccaaaggactgccagagactacc
acatcccggcccacgcctctctacggccagccatcgtggtggggagaagacgacgctgga
aacaaagtgccgcccacagaagggacacgaccagaggaaatacactccgagggcccgaaa
gagacggccagacatgacctagaaatcaatgggaccattgcagattaccgggactccccg
ggtaagtctatctacgcctaccgccgggagcccagttacttcgaaatccccaccaaggag
ttccagcagcaccacaagtccccagaggcagaggtgcatgagatccccaccaaggacacc
gacaatgccccctcccctgtcccagccactacgccccccgtggtccagagccacgcctcg
ttcaccatcgagtttgacaattgcacccccggcaagataaagatcagggaccacgttacc
aagttctccatgcgccagcggcagtttggcaaggacctggcagcagcccccaccgaggtg
atgtcagcggagagcaaggtggccgactggctggtccacaacgatcccagcttgatgagg
aggaagcccccctgcgacgatgtgtacagcactaagagcgacctgcccgtttacatcaag
acgcttcaagtcaacagacacgaagacgggacccagagcgactcggaggaccccatcctg
tcggagaaacccaataagcagaccactcctgaggaggagccacttaattcgccacccgag
tctcactcatctctccagagccaaaccaaactggaaacccaggagtcactcaaccagcag
gccttcgttatagagttctttgacaatccccgcaagaagaggtcgcagtcgttcacccac
aattccgtgaacggtgattcctactccgcactcaaagccaagctggaaaaacggaaagtg
gccacagcctcgacgcaacacacaagcgggccggtgaagagtgcggcaggcccccagagg
tccagctcactcaaacgagagaagacagaagaccgtctcagctcaggctcctccttgttc
tcctcccgcacgccagtgaccgtgaagccctttggcagcgtggggaagaaatccaagctg
gcccaggactttgcggcagagttattgaaagctcaaagtgtcaccactctggctgtcgct
acccccgcctctgaaaaaccaatccctcagccagtgtctgctcccccagtgatggagtct
gctcctccccaacttccaactccccctcccgctcagcctgtctccccgtttttgacggtt
gcacccctggctgcacctcttgcgtttccccttgcagttcggtccctggacatgaaacca
ggaaaactgggccggaatgaggaggacgacagcctgagtgatgcagggacctacaccatc
gagacggaaacacaggacaaagaggtggaggaagctcggaacatgatcgaccaggtgttt
ggtgttcttgagtcccctgagtacactggagtatataggcccgtgattaatgatgacagg
gaagaacataatagctgtcgtcatagcaaaagtagtactgtggatcaaaaggagactcca
ttgcagggctataacccagcagtcgttagtggcccacagattgaaggaaccggacaggct
cgacacgtagggccggttcctccaggagggccgaagtgggtatccaggtgggccagtctg
gcagacagctacggcaactctggacccaccagcggcttgcatgatctgcagcagcatggg
gatgttacagacggaggtaggagaatcggtcacccgcccataatgagtaggactgcagaa
catacagaatcagacagtacccagtctgcaagaacaagaagactccttcctcaagttcca
ccagcagaaaagtctgaaagccccacacccagtattgtaatccggccggacccttatccc
agctacggggttcctgaaagagggagtggaacaccgcggcagcaggaatcagctcagagg
ctgtgcgttcaggatgacctggatcccgacagcctgagcgatgcaagcaagtcagatgat
ggttctgcagtgcagaagaataagaaacacagaactgggagaggcattgacaaaactaaa
ccagaaaagctgtggactgataacaccaatgttcagagactagaagaaaaacctgcggtg
acaggaacgagagctacctctttctacatcggatctaaagagacgccttcaaagcagacc
tctgggcatggccacactgtgtctcgagcagacagtgagcccgaaatctcatccaagcct
gccagttcaaccgttttggggaaacatttggccaaactggatgccaaagaaacagggaaa
cagtctgtcttggtccaaaagatctgtttgcaagagaaagaagctgtgactccaaaagaa
tcttctacttcttttgtcagacaggaaagcttcaccaaagacagacctagtgatgatgtt
ccaataaacaagctcccgcacatttctagccatccagctctgaaagatcttgatgttagg
cacgcctacggtacagattgcagccaggacacacagctgtttctcaaggacactgaaaat
gcattggcggctttggaggcaaagttccattctcatgggccccacagatgccagaaatct
gaaacctccataacccagatggaagactctttgtctggtgaatctgatgttgacacagcc
agtacggtcagccatgtcagcagcaaaaaaaacactgtcagcgccgtgccgcaaaagagg
tatatcaatagtctccaaaaagagaagtcctcttcaacgccttccatccaggatcagtat
ggcccaaccagcgctcgcgagaggctctcagaaaagcgcagaacgcaaatgtcggaggga
gggaccaaagcggactcaaccaagcggttccagctgaggcgtagcactgggaaccggggc
tccttggactttacggaagatgtccggagcaccagcctcccatactggccagattccttc
tcttcagaccacgaatcaagttcccgtccaacaatgcggaagaagctcatcgcccagccc
cagaaggaagaccctagcaaagtccccaagtccgtggtctaccaggccctcacccgttca
aacagcttgtcagcacctaggcctaccagggcatccatgctgcgcagggcccgtctggga
gaggcttctgataacgagagtaccgagaccgaccgtgtgtctctgaactcagacgcctct
ggtccttccaaacctccgacagacagcaagaagctctctcgtctggacctcttggccatg
ccaaggaagcgaacgggctccttcacaatgcccagtgacacagagacctccacgtccagg
tctggcttctctaatcgtagtatggaattcagcagttcaattcgcaagtcagttgcagcg
gaggccaagcccacagccaagaggactccaggggcaggggtaaagcagcctgtctccagg
ggccggtcgagcagtgccaggtattccagtgctacatccagctccagacggcgccagaag
ggctccgattatatctctacgtcagatgaggagtatgagtccagtcatacttcccctaaa
cacaaacgctcccatgcttcaacagccacgcagacctccagagcccaggctgctgagagg
cgcaaagtgcagtccagagagactgaggaagaggaggaggatgaagaggctgacccctat
caacactggtcatcgcacagcgcagagatagcgaagctgagtcaggacctggctaaagac
ctggcgatcctggcccgggagatccacgatgtggctggagacggagactcccagagctct
tctggcactgggcccagtacctccctcagctctgtacccaacacccctgcatcaaccatg
tcagccagggaagagaatgcattgccatcaccacaagcaaccctttcatcacagctggtc
cagcacattcccgaagccagcttaaactttcagaaagtcccaccaggttcaacagggctc
aagaaggaactcgaccaaaacatgaatgaccgtgacttgaaacgtcgctcttggagcaga
gaagaggtcattctggacaacctgatgctaaaccctgtgtcgcagctctcccaagccatt
cgagaaaacacagagcaactggcagagaagatgaagattctgtttcagaacagaacagga
aactggcaggatattgaagcaaaaatgtattctgaaaacgaagtgccgattttgaagacg
tcaaacaaggagatcatgtcgattctgaaagagctgagaagagttcagaagcagttagaa
gtaatcaacactatcatcgaccccagcggaaaccctgacctgggatccagagccttctcg
attggggctcccccagccagcgcgagaggcaggactggccccagtgggagttctcctcgg
gactccaagtctcctgcacagcgagggagctgccagtcctcaaacgccaacaccagggga
aagagggaggcatgcgctgaagaggagagctacatagtctga
DBGET
integrated database retrieval system
