Polyodon spathula (Mississippi paddlefish): 121329809
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Entry
121329809 CDS
T07273
Name
(RefSeq) liprin-alpha-1-like isoform X1
KO
K26226
liprin-alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121329809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121329809
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121329809
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
121329809
NCBI-ProteinID:
XP_041131591
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Position
17:complement(1996617..2028452)
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AA seq
1303 aa
AA seq
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MMCEVMPTISEAEIPSGGGGGGGSGSPLQSDADGHFESLMVSMLEERDRLLDTLRETQDT
LGLTQGKLHEVSYERDSLQRQLNTALPQEFAALTKELNICREHLLEREEEISELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSALEEQLACSHKELAILREQNSQKKALINNGIVEMNHDSENVPSTNGKRSS
DGSLNHEEDLAKVMELQEIIDRQTKDLGQMKERLAALSSRVTELEEDLDTARKDLIKSEE
MNTKYQRDVREVMAQKEDMEERITTLEKRYLAAQRESTSVHEFNDKLENEIANKESMFRQ
SEEKNRQVQERLELAEQKLKQTLRKAESLPEVEAELAQRVAALTKRDSAVSGDSILKESK
LLELASIRRKAEERHGNIEERLRQMEAHLEEKNQELQRARQREKMNEEHNKRLSETVDKL
LSESNERLQLHLKEKMSALEDKNALIHDLENTKKQIEDAHHEKEQLLIEIETMRAENEQA
RLRSTSSLHHGRAHLGSTPDFRYPVSTSSMMDSHTDQFNTSVLRRPLKGRMAALRDEPSK
HVQTLNEQEWERVQQANVLANVAQAFESDVDVSDIEDDRETVFSSVDLLSPSGQADAQTL
AVMLQEQLDAINNEIRMIQEEKETTVQRAEEIENRVGSGSLENLCSKFRSMNSIPPSFTG
SSLAGSSPPGSGHSTPRRVPRSSAREVDRQGSMTLPSSYNRFVIQTSIPHQTVVYPSNTS
PNLTPSYNDSSCSSQSPVSQDDKATIKCETSPPSTPRSMRFHKGPTHAASHEDIRDIRSS
TGSQDGQGSNPSSSNSSQDSLNKAPKKKSIKSSIGRLFGKKEKGRPGPPGKEAMGQSGTP
EGDTSPQDALGLSKLGGQVEKNRKLQKNANSGHELLEEARRQGLPFSHWDGPTVVVWLEL
WVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSA
PPTSRTSTGNVWLTHEEMENLAASPQTEDEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQ
YRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRQELERKRE
ECQVKVKDVLVWSNDRVVHWVQSIGLKEYANNLVESGVHGALLGLDETFDHNALALLLQI
PTQNTQARAVLEREYNNLLALGTERRLDEDDDKNFRRAPSWRKKFRPKDIRGMSPGSAET
LPANFRVTTAMSSPSMQPKKMQVDGNITGAQRMDSATVRTYSC
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccaacgatcagtgaggctgagattccatcaggcggaggtggg
ggcgggggttcgggctctcccctccagtcggacgctgatggtcattttgagtcgctgatg
gtgtcaatgttggaggagcgggaccggcttctagacacgctgagggagacccaggatacc
ctgggcctgacccagggaaagctgcatgaggtcagctatgagagggattcactacagaga
cagctcaacactgcacttccacaggagtttgctgcacttactaaggaacttaatatatgc
agagagcaccttcttgaacgagaagaagaaatttctgaattaaaggctgaacgaaataac
acacggctgcttttagaacacttggaatgccttgtatcgaggcacgagcgctctctcaga
atgacagtagtgaagagacaagcacagtctccagcaggggtatccagtgaagtggaagtc
cttaaagcactgaagtctttattcgagcaccacaaagctttagatgaaaaggtaagggaa
cggttacgagttgcgttggaaagatgcagtgcattggaagaacagctagcctgttctcat
aaagagctggctattttgagagagcagaatagccaaaagaaagctttgattaacaatggg
atagtggaaatgaaccacgactcggaaaacgtaccgagcacaaacggaaagaggtcatca
gatgggtctcttaatcatgaagaagatctggcaaaagttatggagcttcaggagatcatc
gacagacagaccaaggatctgggtcagatgaaggagcgattagctgctctttcaagccga
gtaactgaattggaagaagatcttgatacggcccgcaaagatctcatcaagtctgaggaa
atgaacactaagtatcagagagacgttcgggaggtcatggcccaaaaggaggatatggaa
gagagaataacaaccctcgaaaaacgctacctcgctgcacaacgtgaatctacatctgta
catgaattcaatgataaacttgaaaatgaaattgcaaacaaagaatcaatgtttagacag
agtgaggagaagaaccggcaggtacaggagaggttggaactggctgaacagaagttaaag
caaacactaaggaaagcagagtcccttccagaggtggaagcagagctagcacagagagtg
gcagcacttaccaagcgtgactctgctgtgtctggcgactccatccttaaggaatctaag
ttgctggaacttgcctcaatacgcaggaaggctgaagagagacatggaaatatcgaggag
cgcttacggcagatggaagcacatctggaggagaagaaccaagaactacagagagctcga
cagagggagaagatgaatgaagaacacaataaacgattgtcggagacggtggacaaattg
ctttctgagtcaaatgaaagattgcagcttcatctgaaggagaagatgtctgctttagaa
gataagaatgctctcattcatgatctggagaacaccaaaaaacaaattgaagatgcacat
catgagaaggaacaacttctaattgaaatagaaactatgagggctgaaaatgagcaggca
aggttgagaagcacttcttcactgcatcatggccgcgcccatctgggcagcacccctgat
ttcaggtatcctgtatcgacttcctctatgatggacagtcatacagaccaattcaacaca
tcagtgttgcgacgcccgctaaaaggccgtatggcagcccttcgagacgagccttcaaag
catgtgcagacgctaaacgagcaggagtgggagagagtgcagcaagccaacgtcttggct
aacgtggcccaggcatttgagagtgatgtggatgtgtctgacatagaggacgacagagag
actgttttcagttctgttgatctgctgtccccgagtggtcaggctgatgcccagactctg
gctgtgatgcttcaggagcaattagatgccatcaacaatgaaattaggatgattcaggaa
gagaaggagacgacagtccagcgggctgaggagattgaaaaccgggtgggaagtgggagt
ttggaaaatctttgcagcaaattcagatccatgaactccattcctccctctttcactggc
tcctccctggcgggttcctccccccccggcagcgggcactctacccctcgccgcgtaccg
cgcagttctgcccgtgaggtcgaccgacaaggtagcatgactttgccctcgtcctacaat
agatttgtaatccagacctcaattccccatcagactgtagtttatccatccaacacttct
cctaatttgaccccatcatataatgattcatcatgcagctctcagtccccagtatcacaa
gatgacaaagctacaataaaatgtgagacctctcctccatcaacacccaggtctatgcgt
ttccacaagggacccacccacgcagctagccatgaagatatcagggatataagaagttcc
accggttcccaggacggccaaggcagtaaccctagcagcagcaacagcagccaagattct
cttaacaaagcccccaaaaagaagagcatcaaatcttccattggccgactgtttggcaaa
aaagagaagggtcggcctggaccgcctggcaaagaagctatgggccaatcaggtactcca
gaaggggatacttctcctcaagatgccttaggacttagtaaactgggaggacaagtggaa
aaaaatagaaaattacagaaaaatgcaaattcaggacatgagctactagaggaggctcgc
aggcaaggtttaccattttcacactgggatggtccaactgtagttgtgtggttggagctc
tgggttggaatgccagcctggtacgtggcagcttgcagagccaatgtgaaaagcggtgct
attatgtcggctttgtctgacactgaaatacagcgggagattggaattagcaatccttta
cacaggttaaagctacgtctggctattcaggagatcatgtctttaacaagcccgtctgca
ccaccaacctccagaacgtccactgggaatgtgtggcttacgcacgaagaaatggaaaac
cttgctgcctcaccccaaacggaggatgaggagggcagctgggcccagacactggcctat
ggtgatatgaaccacgagtggattggtaatgaatggcttccaagtttggggctgcctcag
tatcgaagctacttcatggagtgccttgttgatgctcgaatgctggaccatttgacaaag
aaggacttacgggggcaacttaaaatggttgatagttttcaccgaaacagtttccagtgc
ggtataatgtgtctacgaaggctgaattatgatagacaagaacttgaaaggaaaagagaa
gaatgccaagttaaagttaaagatgttttagtatggagcaatgacagagtggttcactgg
gtgcagtccatcggtctcaaggaatatgcaaataacctggtagaaagtggagtccacgga
gcgcttcttggcttagatgaaacttttgatcacaatgcattagcgcttttattacagata
ccgacccaaaatacgcaggcaagggccgttctagaaagagaatataataatcttcttgct
ctgggtactgaaagaagacttgatgaggatgatgataagaacttcaggagagctccctcc
tggaggaagaagtttcgaccaaaagacattcgggggatgagtcctgggtcagcagaaact
cttcctgcaaactttagggttaccaccgcaatgtcttcaccttctatgcagccaaagaaa
atgcaggtggatggcaacataacaggagcgcaaagaatggattctgcgacagtaaggacc
tactcatgttaa
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