Polyodon spathula (Mississippi paddlefish): 121329842
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Entry
121329842 CDS
T07273
Name
(RefSeq) myosin-binding protein C, cardiac-type-like isoform X1
KO
K12568
myosin-binding protein C, cardiac-type
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121329842
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
V-set
THB
Ig_DSCAM-DSCAML_C
Tissue_fac
Ig_CYK3_C
DUF7308
Motif
Other DBs
NCBI-GeneID:
121329842
NCBI-ProteinID:
XP_041131675
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All DBs
Position
17:3280828..3322368
Genome browser
AA seq
1272 aa
AA seq
DB search
MPEPTKKAASAFTKKPKSSEAVAGGVVVFEAETEKTDTKVKWQRDSADIVASEKYLITAD
GNKHSLTITSISKEDDVIYSVIAGSSKVKFELKVKEQQEKTENAASSSPASAEGQPQASC
EHEAPAESQQPDTRQDLTGLFLEKPQSGEVTMGANITFTAKVGSANLIKKPAVKWFKGKW
MDLASKAGKHLQLKELYDRNTKVYTFEMQIIGAKANYSGAYRCEVSSKDKFDSCNFDLIV
HEARVEEIDIRAAFRRTSLIPGGKRKSTAGGSSCDGAEEAGELDFSALLRKRDSFIKASN
RATHVSNEPEVDVWDILKKAPASEYEKIAFQYGITDLRGMLKRLKRMKKEEKKSEAFLKK
LDPAYQVDKGHKMKIVVEVADPDAEVKWLKNGQEIQMSGSKYIFENVGNKRILTINNCCL
ADDAAYQCVIGEEKCFTELFVKEPPVLILQSLEDQMAMKGERVEFECEVSEEGALVKWEK
DGVELTREETFKYRFKKDGRKHYLIINEASKEDCGHYMVKTNGGESVAELMVQEKDLEVY
QSIADLTVKAKDQAVFKCEVSDENVKGIWYKNGMEVKASDRVHITHIGRNHKLTIDDVKP
EDEGDYTFVPEGYAFNLSAKLNFLEVKIDYVPRQDPPKIHLDCVGHTPETTIIVVAGNKL
RLDVPITGDPAPTVVWTKADKGKTRPKKSEESSDMEFSADLMKDGKVISDTDGRVHVESL
KDHCIFTIEGAERGDEGVYSVVVKNPAGEDTADITVKVVDVPDPPEAPKIVSLGEDWCNV
QWEPPAFNGGQPVLGYVLERKKKKSYRWMRLNFDPHKGLTYEAKRMIEGMAYEMRIYAVN
AIGMSRPSAPSQPFVPIAPTSEPHCLTVDDITDTSISLKWRPPERIGAAGMDGYTVEYCK
EGTDEWVPAFEGLTERTSVNIKNLPTGEKMQFRVRAINVAGASAPASLAQPVTIREIMQR
PKIWIPRSLRQTVVKKVGETINIVLPFQGKPRPKVTWTKDGEALDPKQVGIRNSDFDTIL
FIRRSELKDSGKYDVAVQIENMEDKASLHIQVVDKPGPPQNLKITEVWGFNVALEWKPPK
DNGNCEITGYTIQKADKKTMEWFNVYDHYRRTNCVASDLIMGNEYIFRVFSVNMCGLSEE
PCTSKDSAYIQKTGIMYKPPSYKEHDFSEAPKFTHPLVNRSVIAGYNATLSCALRGWPKP
KVVWYKNKMDISNEPKFRMFSKQGVLTLEIRKPCPFDGGTYTCKAINDLGEAEVECKLEV
RAYMAKKASQEK
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacctaccaagaaagctgcgtccgccttcaccaagaagcccaagagttcagaa
gctgtggccggcggggtggttgtttttgaagccgagactgagaagacagacaccaaggtc
aaatggcagcgggactcggccgacatcgtggcgagtgagaaatacctgatcactgcggac
ggaaataaacactctctgaccatcaccagcatcagcaaggaggatgacgtcatctactca
gtaatcgcagggagctccaaggtcaaatttgaactcaaagtgaaagaacagcaagagaaa
acagaaaatgctgcttccagctcccctgcctctgctgaaggtcaacctcaagcaagctgt
gagcatgaagctcctgctgaaagccagcaaccagacacgagacaggacctgacggggcta
ttcctggagaagccccagagtggagaggtgacaatgggtgccaacatcactttcactgca
aaagttgggtccgccaacctaataaagaaaccagcagtgaagtggtttaaaggcaagtgg
atggacctggccagcaaagctggcaagcacctacagctgaaggagctgtacgacagaaat
accaaggtgtacacctttgagatgcaaatcattggagccaaggccaactactctggtgcg
tacagatgtgaagtctcctccaaggacaagtttgacagctgcaactttgatctcattgtg
cacgaggcacgtgtagaagaaattgatatccgtgcagctttcagacgcacgagcctcata
ccaggaggtaaacggaagagtacagcaggtggaagtagctgtgatggagccgaggaggcg
ggagagctggatttcagtgctttgctgagaaagagagacagttttataaaagcatcaaat
cgggccacccacgtgagcaatgagccggaggtggacgtgtgggacatcctaaagaaagcc
ccggcgtccgagtacgagaagatcgccttccagtacggcatcaccgacctgcgcggcatg
ttgaagagactgaagaggatgaagaaagaggaaaagaaaagtgaagcattccttaagaag
cttgacccagcctatcaggtggacaaaggtcacaaaatgaagattgtggttgaggtggca
gatcctgatgcggaggtgaagtggctgaagaatgggcaggaaatccaaatgagtggcagc
aagtacatctttgagaatgtcggaaacaaaaggattctgaccatcaacaactgctgtctg
gctgatgacgctgcctaccagtgtgtcatcggagaggagaagtgcttcactgagctcttc
gtcaaagagcccccggtactcatcttgcaatcccttgaggatcagatggcgatgaaggga
gagagagtggagtttgagtgtgaggtctccgaggagggagctctggtcaaatgggaaaag
gatggcgtggagctgacccgtgaggagacgttcaagtatcgcttcaagaaagacggcagg
aagcattacctgatcatcaacgaagctagcaaggaagactgcggccactacatggtcaag
accaatggcggggaatctgtagctgagctcatggtccaagaaaaagacttggaagtgtat
cagagcattgctgatctgacagtgaaggccaaagaccaggctgtgtttaaatgcgaggtc
tcggacgagaacgtgaaaggaatctggtacaagaatggcatggaggtgaaagccagtgac
agagtccacatcacacacattggcaggaatcataaattgacaattgatgacgtgaagcca
gaagatgaaggcgattacacctttgtgcccgaaggatatgcctttaatctctctgccaaa
ctgaacttcctagaggtcaagatcgactatgtgcctagacaagatccacccaaaattcac
ctggactgcgttggccacacccctgagaccactattattgttgtggctgggaacaaactg
agactggacgtgcccattactggagaccctgctcccactgtggtgtggaccaaagcggac
aagggtaaaactagaccaaagaagagcgaggaatcctcagacatggagttcagtgctgat
ttgatgaaagacggcaaagtgatatctgacacagacggccgtgtgcatgtggagtccctg
aaggatcactgcatcttcaccatagagggggcagagagaggggacgagggggtctactcc
gtggtggtgaagaaccctgctggagaggatactgccgacattactgttaaagtcgtggat
gtccctgacccgcccgaggctcctaagattgtcagtctgggtgaggactggtgcaatgtc
cagtgggagccacccgcattcaacggaggccagccagttctggggtatgtgctggagaga
aagaagaagaagagctatcgatggatgaggctcaactttgatccccacaagggtctgacc
tatgaggcgaagcgaatgatagaaggcatggcctatgagatgaggatctacgctgtgaat
gccatcggcatgtctcggcctagcgccccttcacagcccttcgtgccaattgctcccacc
agcgagccccattgcctgactgttgatgacattactgacacctccatctccctgaaatgg
agacctccggaacggataggagcagcagggatggacggctacactgtggagtactgcaag
gagggcacggatgagtgggtgcctgccttcgagggcctaactgagcgcacctctgtcaac
atcaaaaacctcccgacgggagagaagatgcagttccgtgtgcgagccatcaacgtggct
ggagcgagcgccccggcaagcctggcccagcctgtgacaatccgtgagatcatgcagcgc
cccaaaatctggattcctcgcagcctccgccagactgtggttaaaaaagtaggagagaca
ataaacattgtccttcctttccagggtaagcccaggcccaaagtgacttggacaaaagac
ggagaggctctggaccccaagcaagtgggcatccgtaacagcgacttcgacacaatcctc
ttcatccgccggtcggagctcaaggactccgggaagtacgatgtggccgtgcagatcgag
aacatggaggacaaggctagcctccacattcaggtcgtcgacaagcctggaccgccccag
aacttgaagatcacagaggtgtggggcttcaacgtggctttggagtggaaacccccgaag
gacaacggcaactgtgagattacaggctacaccatccagaaagcagacaaaaagacaatg
gaatggttcaatgtgtatgaccactaccgccgcaccaactgcgtggcatcagacctcatc
atgggaaacgagtacatattcagggtcttctccgtgaacatgtgtggcctgagtgaagag
ccttgcacctccaaagacagcgcctacatccagaaaacaggtatcatgtacaagccaccg
tcctacaaagagcatgacttttctgaagcacccaagttcacacatcccctggtgaaccga
tctgtaatagcaggctacaacgccaccctgagctgtgccttgaggggatggcctaagcct
aaagtggtctggtacaagaacaaaatggacatctcgaacgagcccaagttccgcatgttc
agtaagcagggagtgctgaccctggagatcaggaaaccctgccccttcgatgggggcacg
tacacctgcaaggctatcaatgaccttggggaggctgaggtggagtgcaaactggaggtc
agagcatacatggctaagaaggcttcgcaagagaagtga
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