Polyodon spathula (Mississippi paddlefish): 121329856
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Entry
121329856 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: formin-like
KO
K10367
formin 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121329856
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
121329856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
DUF7645
Motif
Other DBs
NCBI-GeneID:
121329856
NCBI-ProteinID:
XP_041131713
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Position
17:21705796..21846742
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AA seq
1404 aa
AA seq
DB search
MRLIMEGRHTVHQLHKPIKELSHISLYFPRGRVRRFTYKGSAFSRDQPNCFAKYDQAKEE
PEGVKQKAQSCESIAKHLNLTTTKSAVTEFYRLTAESVRVLADLFAICAYCRSIFQMGNQ
DGKFPGYPESGNLRTDSEDRRCSSSSDVQHFQSLSLSTEQKKTASKSRNMKKLGTRKGDS
AKGILQSKIKRKVYSGTESSSICVSKGKDRNIYSKLPASPKDPGVVSYTSMESSATSASQ
ETDKIEKEDWEVLEDSKNFESDTDLCSELSEYDNEFLTGYGVSYGSSFLDEEDSIKLERN
MCGYYMDSMAEHSLPGRDVKKTADQPYPYQHGVHKRETGIKVVAKLQEVEAVVQKVCRGE
SVESKECTEAANESVTSGFTAVQGRLLTKEDVLCVPVVDSESGLGLSQDCNKKDLSGSGQ
HREAALSNNESCNLGEVVNRNLFKVIQSDSFDEAAELKCLRISRTASRVLEGMQDNKSAL
NLDKNNPEFLMLPLQYSAEGNSSFKLEGKSPTSPSLAAVCNVFNSSFPSSSSYQCMSPAP
SPLSSRLPSPQLNHRILPLPQQCTEEEGALSAVGFSIDSVQKPHTQRPTSKVLDKNGNKS
TVTHLGLSLNRERQGNSGKRNGASVPTPEDPCLKVWLSDSEDVRFSNHETVLLQGSRPEH
LDFVRITPVEGGNLVDKLYYSHQELDSELAFPTDSEDRTPKRLVAVWPPPKPKEEEEKVG
LKYTEAEHQAAILQLKRESKEEVENLQKNFELQVFEIRGEHAVAIAKLEDTIEGLKKNLE
NNVCNKVRGELKEVSVSTEDDMPPKSFRTVCIQTDRETFLKTPEEETRIIQSNQTVPKKL
DLESINQSLAGNTELGGSGPVLPPPPPPPSPNTSAGPPPPPPRRCLTPRLGGRRRELLQR
RGEAEEEPPPLPRLGGGGGKGXQLPGVGVDLRPPCPSLWTPPPPPPPGGFAFSQMFDKKP
RKPAIEPACPMKPLYWTRVQLKENSDSTLWGSLEEPSIQDPKEFEELFSKAAVQQTKKPL
SDSYEKKAKAKKIVKLLDGKRSQTVGILISSLHLDMKDIQQAVLTVDNSVVDLETIEALY
ENRAQSDELDKIKKHYETSKEDEVKLLDKPEQFLYELSQIPDFSGRARCIIFQPAFIEGI
ALVRRKVEIVDRVCKGLLEPRSVKDLLGLILAFGNYMNGGNRTRGQADGFGLEILPKLKD
VKSRDNKTSLVDYVVSYYLRYIDKDAGTEKTVFPLPEPQDLFLAAQVKFEDVTKDLRKLK
KELDACEKEIAVVCKNSSEEHLQPFKEKMETFVQTARQEHSVEEDHLKTALRSFEDTVRY
FGVKPKSGDKEVTPNVVFMLWFEFCNDFKNIWKRESKNISKERLKEAQLSVQKMTAEKKV
ETKRISPNSLKERLRQKEATVSTI
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcataatggaaggcaggcatacagtgcaccaactgcataaacccatcaaagag
ctgagccacatcagcttgtattttccaaggggaagagtcaggagatttacgtacaaaggc
agtgctttttcacgggaccagcccaactgctttgctaagtatgaccaggcaaaggaggag
ccggagggagtaaaacagaaggcccagtcttgtgagagcattgcgaagcatcttaactta
acaacaacaaagagtgctgttacagagttctacaggctgactgcagagtcagtgagggtc
ctcgcggatctgtttgctatatgcgcctactgcaggagcatatttcaaatgggaaaccag
gatgggaaatttccgggctacccagagagtgggaacctgcggacagacagcgaagacagg
cgctgtagcagcagcagtgatgtacagcacttccagtcactttccttatcgactgagcag
aagaaaactgcatccaaaagcagaaatatgaagaaacttggcactaggaagggggatagc
gcaaaagggattctgcagagtaaaatcaagaggaaagtgtacagtggcacagagtcgtcc
tccatctgtgtttctaaaggaaaagacaggaatatttacagcaaactccctgcaagtccc
aaagaccctggtgtagtgtcctacaccagcatggaaagcagtgccacgtcagcttctcag
gaaacggataagatagaaaaggaagactgggaagttttagaggactccaaaaactttgag
tcagacacagacctgtgtagtgaattatcagagtatgataacgagttcctcacagggtat
ggggtttcttatggcagcagcttcctggatgaggaagacagcattaaactggagcggaat
atgtgtggatattacatggacagcatggcggagcacagtttacctggcagggatgttaag
aagactgcagatcagccttacccttaccaacatggagttcacaaaagagaaactgggatt
aaagttgttgctaaactacaggaggtggaagctgtcgtgcagaaagtgtgcagaggagag
tcggtggaaagcaaggagtgtacagaagcagcaaatgaaagcgtcacatcagggttcact
gcagtgcaaggcagacttctcactaaagaagatgtactctgcgtacctgtggttgattca
gaatccggcttaggtttgtctcaggactgcaataaaaaggatctttctggctcgggacaa
cacagggaagcagctctctctaacaatgagtcttgcaatcttggcgaagtggtcaataga
aatctttttaaagttatccaaagtgacagtttcgatgaagccgccgaattgaaatgcctg
agaataagcagaacagcctcaagggttttagagggaatgcaggacaacaaaagtgcatta
aacttagacaaaaataacccggaatttctgatgctacccctgcagtacagtgctgaggga
aacagcagttttaaattagagggcaagagccccacttcaccttcattagctgctgtatgt
aacgtgtttaacagctccttcccctcgtccagtagctaccagtgcatgtcacctgcccca
tccccgttgtcctccagacttcccagcccacagcttaaccacaggatcctgcctctaccc
cagcagtgcacagaggaggagggggctctatctgctgtaggcttttcaatagacagcgta
cagaagccccacacgcagagacccacctccaaggttttggataagaatggaaacaaaagc
actgtgacacacctgggcttgagtctgaatagagagaggcagggtaacagtgggaaacgg
aacggagcgagtgttccaaccccagaggatccctgtttgaaggtctggctgtcggacagt
gaagatgtccggttcagtaaccatgagacggtattgctgcagggctcaaggccagagcac
ttagacttcgtccgaatcacgccggtggaaggtggcaacctcgtggacaaactgtactat
agtcaccaggagctggattccgagctggcctttcccactgacagtgaagacagaacgccc
aagcggctggtggctgtgtggcctccacccaaacccaaagaagaagaagagaaagtgggc
ctgaagtacacggaagctgaacatcaagctgccattcttcaactaaagagagaaagtaaa
gaagaagttgaaaacttacaaaaaaactttgaactgcaggtctttgaaatacgaggggag
catgctgtagcgattgcaaaacttgaagatacaattgaaggactcaaaaagaacttggaa
aacaatgtctgtaataaagtcaggggagaactcaaagaggtctctgtttccacggaagac
gacatgccgccaaaatccttccgcaccgtgtgcatccagacagacagggagaccttcctc
aagacccctgaggaagagaccagaattatccaaagcaaccaaaccgtgcctaaaaagctg
gaccttgagtctataaaccagagtcttgcaggcaacacagaacttggtggttcaggacca
gtactaccccctcctcccccccccccctctcctaatacgagtgctgggccccctccacct
ccaccccggaggtgcctcactccgaggttggggggaaggaggagggaactcctccaacgc
cggggggaggcggaggaggagcctcctcctctcccacggctcgggggggggggtggaaag
gggntacagttgccgggggtgggggtggacctccgccccccatgcccgagcctctggacc
ccaccaccaccccctccaccaggaggctttgctttcagccagatgtttgacaaaaagccc
cggaaacctgcaatagagccagcatgccccatgaagcccctgtattggactcgagttcag
ctcaaagagaacagtgatagcactttgtgggggtcactggaggagccaagtatccaagat
cccaaagagtttgaggagctgttttccaaagctgctgtccagcagacgaagaagccgctg
tcagactcctacgagaagaaggcaaaggccaaaaagattgttaagctgctggatgggaag
cgttctcaaactgttgggatcctgatttctagtctgcacctggacatgaaggatattcag
caagctgttctgactgtggacaactcagttgtggacttggaaaccattgaagctttgtat
gaaaatagagcacaaagcgacgagctggataagataaagaagcattacgaaacttcgaaa
gaggacgaggtgaagctgcttgacaaaccagaacagttcttgtacgagttatctcagatt
cctgatttctccggacgagcccgttgtattatattccagcctgcattcatcgagggaatt
gctttagtgcgtcgcaaagtagagattgtagatcgtgtttgcaagggcttgttggagccc
cgcagtgtcaaggacttgctaggattgatcctggcttttggaaattacatgaacgggggg
aatcgtacaagagggcaggcggatggctttgggttggaaattttaccaaagttgaaagac
gtgaagagcagggacaataaaaccagtttggtggattacgttgtctcatattatctacga
tacattgacaaggatgcaggaacggagaagactgtcttccccctcccagagccgcaggac
ctgtttctggccgcgcaggtcaagtttgaggatgtgacaaaggacctgaggaaactgaag
aaggagctggacgcttgcgaaaaagagattgcagtggtgtgcaaaaactcatcagaggag
catctccagccttttaaggagaaaatggaaacctttgttcaaactgcacgccaagaacat
agtgtcgaagaggatcatttgaaaactgctctaagaagctttgaagacacagtgcgatat
tttggtgtgaagccaaagtcgggggacaaggaggtcactccaaatgttgtctttatgctg
tggttcgagttctgtaatgacttcaagaacatttggaagcgtgagagcaaaaatatttcc
aaagaaagactcaaggaggcccagctgtctgttcagaaaatgacagcagaaaagaaggtt
gaaaccaagaggataagccccaacagtctgaaagaacggctacgtcagaaggaagcaact
gtaagcaccatctaa
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