Polyodon spathula (Mississippi paddlefish): 121329857
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Entry
121329857 CDS
T07273
Name
(RefSeq) neurexin-3-like isoform X1
KO
K07377
neurexin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121329857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121329857
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
121329857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
121329857
NCBI-ProteinID:
XP_041131714
LinkDB
All DBs
Position
17:complement(30233383..30557782)
Genome browser
AA seq
1684 aa
AA seq
DB search
MNPTCFSFKAHLLLNTLFGLYSGLEFTGTPGQWARYLRWDASTRSDLSFQIKTDVSTALL
LYFDDGGYCDFLQLMIVEGKMQLQFSIDCAETTIVSDKRVNDSNWHFVMLSRSNLRTVLV
VDSETQADEVRPQRQYMKIVSDLFIGGVPVDIRSSALTLPPVKDQPLFKGIITDLKYGNS
EPNLLGSQAVRLGMEGMCTENPCENGGSCLLIDGEPKCDCSITGYVGQFCSEEVNHVPGF
SHLMMGEQGKSKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTG
KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDG
ILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELS
RLARIGDPKMKIQGDVAFKCENVATLVPISFETPEAFISLPKWNTKRMGSISFDFRTSEP
NGLILFTHGKPQDRKDSRSQKNTKVDFFAVELLDGSLYLLLDMGSGTIKVKATQKKVNDG
DWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAGLILPTELWT
AMLNYGYVGCIRDLFIDGRSKDIRQIAEEQNGAGIKPSCSKITSKQCESYPCKNNAVCKE
GWNRFICDCTGTGSWSKTCEREASILSYDGSMYMKVVMPMVMHTEAEDVSLRFMSQRAYG
LLMATTSRESADTLRLELDGGRVKLTVNLDCIRINCNSSKGPETLYAGQKLNDNEWHVAR
VVRRGKSLKLTVDDDTAEGQMVGDHTRLEFHNIETGIMTERRYISVIPSSFIGHLQSLMF
NGMLYIDLCKNGDIDFCELNARFGMRSIIADPVTFKSKSSYLSLATLQAYTSMHLFFQFK
TTTPDGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDKALHDNMWHNVVIT
RDNSNTHTLKVDAKAVTQVINGAKNLDLKGDLYIAGLAQGMYSNLPKLVASRDGFQGCLA
SVDLNGRLPDLINDALHRSGQIERGCEVEFTKADLQGPSTTCQEDSCANMGICIQQWENF
TCDCSMTSYAGNQCNDPGATYIFGKGGGLIRYTWPANDRPSTRTDRLAVGFSTSLKDGIL
VRIDSAAGLGDFLQLHIEQGKIGVTFNIGTVDISIQETSTPVNDGKYHVVRFTRNGGNAT
LQVDNWQINEHYPTGSSDYERLQMVNKKIPFKYTRPVEEWLQEKGRQLTIFNTQATITIG
GNDRKRPFQGQLSGLYYNGLKVLNMAAENNPNIKINGSVRLVGDVPSVLGSSTTTSMPLE
MSTTFIETTTTLSTTTTRKHRSPPTIQTTDDIVSSAECSSDDEDLDECDTGHPGGIGGEL
VIPVLVEDPLEIPPIATRAPFITLPPTFRPLLTIIETTKDTLSMTSEAGLPCLSDQGSDD
CDDDGLVISGYGSGEAFDSNLPPTDDEDFYTTFSLVTDKILSTSTFEGGYKAQAPKWESK
DFRPNKAFEPGRTTTMSLSPELIRTTTSSTPEMVPKLPAGKMNNRELKPQPDIVLLPLPT
AYELDSTKLRSPLITSPMFRNVPTANPTEPGIKRVPGASEVVRESSSTTGMVVGIVAAAA
LCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQTNGAVLKEKQQSAKSSNKKQKNKDK
EYYV
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctacctgcttctcattcaaggcacacttgttgctcaatacattatttggcctg
tattctggccttgagtttacagggactcctggacagtgggcccgttacctccgctgggat
gccagcacaagaagtgacctaagctttcaaatcaaaacagatgtttccactgccctgctt
ctctatttcgatgatggtggatactgtgattttctccagctgatgatagttgaagggaaa
atgcagttgcagttcagcattgactgcgcagagaccaccattgtctctgataaaagggtg
aacgacagcaactggcactttgtcatgctaagtcgcagtaatctgagaactgtcctggta
gtggacagtgaaacacaagcggatgaggtcaggccacagaggcagtacatgaaaattgtt
agcgatctgttcattggaggggttccagtggatatccggtcgtctgcgttgactctgccc
ccagtgaaagaccagccattgtttaaaggaattatcacagatctcaagtatgggaactca
gagcccaaccttcttggcagtcaagcagtaagattgggcatggaaggcatgtgcacagaa
aatccatgtgaaaatggtggaagttgcttgctaatagatggggaaccaaagtgtgattgt
tccatcacgggatatgtgggacaattctgcagtgaagaagtcaaccatgttccaggtttc
tcacatctgatgatgggtgaacaaggtaaaagcaaagcgagagaggaaaacgtcgcaacc
ttccgaggatctgagtacttttgctatgacctgtctcagaaccccatccagagcagcagc
gacgagataaccctgtccttcaaaacgtggcagagaaatgggctcatcctgcacacaggg
aagtcggcggattatgtcaacctcgccctgaaagacggagcggtgtccctcgttattaac
cttggatcgggggcgtttgaagcaatagtagagccagtaaatggcaaattcaacgacaac
gcatggcatgatgttaaagtcacacgcaacttgcggcaggtaacaatttctgtggatggt
atcctcaccacaactggttacacccaagaagactacaccatgcttggctcagatgatttc
ttctatgttggtggaagccctagtacagctgatctacctggttctcctgtcagcaacaat
ttcatgggctgcttgaaagaggttgtttataaaaacaatgatatcagattggagctgtcg
cgtctggccaggatcggagaccccaaaatgaagattcaaggagatgtggcgtttaagtgt
gagaatgtggccaccctggtccccatatcgtttgagaccccggaagcattcatcagcctc
cccaaatggaacaccaaaaggatgggctcgatctccttcgacttccgcacatcagagcca
aatggtcttattctgtttactcatgggaaaccccaggacaggaaagattccagaagtcag
aagaacactaaggttgacttctttgctgtggagctactggacggcagtctgtatttacta
ttggacatgggctctgggacaatcaaggttaaagccacccagaaaaaggtgaacgacgga
gattggtatcatgtggatatacagcgtgatggaagatcaggtaccatatctgtaaacagt
cgtcgcaccccgtttactgccagtggagaaagtgagattcttgatttagagggtgacatg
tacttaggtggtttgccagaaaaccgagcagggctcatcttgcccacagagttgtggact
gcaatgctcaactatggctatgtgggatgcatcagggacctgtttattgatggccgaagc
aaagatataaggcagatagcagaggaacaaaacggtgccggaataaagccatcatgttcc
aagatcacctctaaacagtgtgaaagttatccatgtaaaaacaatgcagtatgcaaagaa
ggctggaatagattcatctgtgattgcactggcactggctcctggtccaaaacatgtgaa
agggaggcctccattctcagctatgatggtagcatgtacatgaaggttgtgatgcccatg
gtcatgcatacagaggctgaggacgtatccttgcgtttcatgtctcagcgggcatatggc
ctgctcatggcaaccacatcaagggagtcagcagacacactaaggcttgaacttgatgga
ggacgtgtgaagctgactgttaatttagactgtatcaggataaactgtaactccagcaaa
ggaccagaaacactctatgctggacaaaaactcaatgataatgaatggcatgtagcccgt
gtggttcgacggggtaaaagcttgaagctcacggttgatgatgacactgctgaaggtcaa
atggtgggagatcacactcgcctggaattccacaatatagagacagggattatgacagag
aggcgctacatttcagtcatcccttccagttttattgggcatcttcagagcctgatgttc
aacggaatgttatatattgacctttgtaaaaatggtgacattgacttctgtgaactaaat
gccaggtttggaatgaggtcaatcatagctgatccagtcacatttaagtccaagagcagt
taccttagcttggctacactccaagcctacacttccatgcacctcttcttccagttcaaa
acaaccactccagatggattcattctctttaacagtggcgatggcaatgatttcatcgct
gtggagctggtcaaagggtatattcactatgttttcgatctggggaatggtcctaatgtg
atcaaaggaaacagtgacaaagccctgcatgacaacatgtggcacaatgttgtgatcact
agggacaacagcaacactcacacactcaaggtggatgccaaggctgttacacaggttatc
aatggtgccaaaaacctagacctaaaaggcgatctctacattgctgggctggcacagggc
atgtacagcaaccttcctaagctcgtggcctcccgagatgggtttcaggggtgtttggcc
tccgtggatctgaatggccgcctcccagacctgatcaatgatgctttgcaccgcagcggg
cagattgagcgcggatgtgaagttgagttcaccaaagcagacctacaaggtcccagtacc
acctgccaagaggactcctgtgcaaacatggggatctgcatacagcaatgggagaacttc
acatgtgattgctccatgacatcatatgctggcaaccagtgcaatgaccctggggctaca
tacatctttggcaaagggggaggtctcataagatacacatggccagccaatgacagacca
agtactcgcacagaccgccttgcagttggcttcagcacatccctgaaggatgggatcctt
gtacggattgacagcgctgcgggccttggggattttcttcagctacatattgagcaaggc
aagattggagtcacatttaacatcggaactgtagatatcagcatccaggaaacaagcacc
cctgtgaatgatgggaagtatcacgtagtacgttttacaagaaatggtggcaatgcaaca
cttcaggtggacaactggcaaataaatgaacactatccaacaggcagcagtgattatgag
cgtcttcaaatggtaaataagaaaatcccattcaaatatacccggccagtagaggagtgg
ctacaagagaaaggccggcagttaaccatcttcaatacccaggctacaataacaattgga
gggaatgataggaagcgtccgttccagggtcagttgtctggtctctactacaatggtcta
aaggttctcaacatggcagcagaaaacaaccccaacattaaaataaacggcagtgtaagg
ttggtgggtgatgtgccgtctgtcctgggatcatcaacaacaacttccatgcctctagaa
atgtccacaaccttcatagagaccaccaccactctgtcaacaactacaacccgaaagcat
cgctctccacctaccattcagactacagatgatattgtttcctccgcggaatgctccagc
gatgatgaggatctcgatgagtgtgacacaggtcatccaggtgggataggaggtgaatta
gtaatccctgtacttgtagaagatcccttagaaatccctcctatagctactcgtgcaccc
ttcatcaccctcccccctacctttcgccccctccttaccattattgagaccaccaaagat
accctgtccatgacctccgaggcggggttaccttgcttgtcggaccaaggcagcgatgat
tgtgatgatgatggcttggtgatatctgggtatggctcaggggaagcttttgactctaac
ctgccccctactgatgatgaagatttttacaccaccttctccctggtaacagataagatc
ttgtctacgtcgacctttgaaggtggctacaaagcacaagcgcccaagtgggagtccaag
gactttagacctaacaaagccttcgaacctggtaggactactaccatgtctttgtcccct
gagctgatccgcaccacaacttcttccacgcccgaaatggtacccaaattgccagcaggc
aaaatgaataacagagagcttaagccccagccagacatagtgttgcttccattgcccact
gcctatgagctagacagcacaaagctaaggagcccattaataacctccccaatgttccgt
aatgtacccacagcaaaccccacggagccaggcatcaaacgggttccgggggcctcagag
gtggtccgtgaatctagcagcaccactggaatggtcgtcggaatagttgctgcagctgct
ttgtgcatcttaattctcctctatgccatgtataaatacagaaacagggacgaaggatct
taccaggttgatgaaactagaaattacataagcaattcagcacagacaaatggcgctgtt
ttgaaggagaaacagcaaagtgcaaaaagtagcaacaagaaacagaaaaacaaggacaaa
gaatattatgtgtaa
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integrated database retrieval system
