Polyodon spathula (Mississippi paddlefish): 121329874
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Entry
121329874 CDS
T07273
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121329874
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121329874
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
PAS_4
Per3-like_PAS-A
bHLH_INO2
bHLH_NCOA
PAS_2
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
121329874
NCBI-ProteinID:
XP_041131779
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Position
17:5539746..5556204
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AA seq
630 aa
AA seq
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MADQRMDISSTMNDFMSPGPTDLISSSLSAPGMDYTRKRKGSSTDYQLDGFSFEDGMDTD
KDKQLGRECSDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTV
LRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSE
SVYKILNYSQNDLIGQSLFDYLHPKDIPKVKEQLSSSDTAPRERLIDAKTGLAVKTDNAP
GPSRLCSGARRSFFCKMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPT
KMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPMNGDIRVKPTEYVSRHAIDGKFVFVD
QRATAIFAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFI
TLRSRWFSFMNPWTKEVEYIVSTNTVVSGSTLDGADPTFQLAASPHSMDSVLQAGDGAGK
RALPTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNFTSTPPPDTSSP
GGKKIHNGGTPDIPSAALAPGQGQDSIGYPYSDNSLLSDNSHIGIEMIDNDQGSSSPSND
EAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccagagaatggacatttcttcaacaatgaatgacttcatgtcaccgggtccc
actgatctgatttccagctccttgagtgctccaggcatggactacactcgcaagcgaaag
ggaagctctacagactaccaacttgatggcttttcctttgaggatggcatggataccgac
aaggataaacaacttggacgggagtgctcagatcagcaaggaagaatcaagaatgccaga
gaggcccacagccaaattgaaaagaggcgtcgagataaaatgaacagttttattgatgag
ttggcctccttggtgcctacttgcaatgccatgtcgaggaagctggacaaactcacggtg
ctacgaatggccgttcagcatatgaaaacgctaagaggtgctgcaaatccatacacagaa
gcaaactacaaacctgcattcctatcagatgacgaactgaaacatcttatactgagggca
gcagatgggtttctttttgttgtgggctgtgatcgagggaagatcctgtttgtatcagag
tccgtgtataaaattcttaactacagtcagaatgacttgatcggtcagagtttatttgat
tacctgcatcctaaagacattcccaaagtaaaggaacagctctcctcttcagacactgcg
ccacgggaaagactcattgatgccaaaactggcctagctgtgaagacagataatgcccct
ggtccatctagactgtgttccggagcaaggcggtcctttttctgcaagatgaaatgcaac
aggccttcggtaaaagtggaagacaaggatttcccatccacatgttccaaaaaaaaagca
gaccgcaaaagcttttgcacaatacatagcactggatatttaaaaagttggcctcctaca
aaaatgggactggatgaagataacgagccagataatgaaggctgcaacctcagctgcctg
gtagcgatcggacgtttgcatcctcatatagtaccacagccaatgaacggggacatccgt
gtgaaacccacagaatacgtctcgcgccatgcgatagatgggaagtttgtgttcgtagat
caaagggctacagcgatctttgcatatttaccccaagaacttctgggcacatcattttat
gaatattttcatcaagatgacattggacatcttgcagagtgtcacagacaggttctacag
acacgagaaaaaataacaacaaactgttacaagtttaaaataaaagacgggtcttttatc
acactgagaagtcgttggttcagtttcatgaacccctggactaaagaagtcgagtatata
gtttctactaacacagttgtttcaggcagcacacttgatggggcagaccctacctttcag
ctcgctgcttcccctcacagcatggacagtgtacttcaggcaggagatggtgcgggaaag
agagctcttccgacagtccctggcattccaggaggtacgcgagcaggagctggaaaaatc
ggccgcatgatcgctgaggaagtcatggagatacaaaggattagagggtcttcgccatcc
agctgtggttccagtcctttgaacttcaccagcacacccccgccagacacctcctcccca
ggaggcaagaagattcacaatggtggcactccagacattccgtcagctgctcttgcacct
gggcagggccaggattcaataggttatccctattcagacaactcgctgcttagtgataac
tcccatattggtatagaaatgatagacaacgaccaaggctccagcagccctagcaatgac
gaagctgccatggctgttatcatgagtcttttggaagcagatgcagggctgggcggtcca
gtagatttcagcgacttgccgtggcccttgtga
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