Polyodon spathula (Mississippi paddlefish): 121329877
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Entry
121329877 CDS
T07273
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121329877
04090 CD molecules [BR:
pspa04090
]
121329877
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121329877
CD molecules [BR:
pspa04090
]
Proteins
121329877
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
Motif
Other DBs
NCBI-GeneID:
121329877
NCBI-ProteinID:
XP_041131810
LinkDB
All DBs
Position
2:9765258..9845379
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AA seq
847 aa
AA seq
DB search
MMGKAGLLLLMLCGCTVCGSQTSMQESPQGTLDFGFVPSGVYETHAYFEPGPIGILFHLV
HSFLYVVQPNPFPHDLVTKVAQKKLREVKQEYKKPENIVLTLQAIYYEIGFIVCASLGVL
FVLFMPLVGLCFCMCRCCDNCGGEMHQRQKKNADCRRGCFVTLLFVTSLIISAGVLCAYS
ANQNLSTQLKGVRKLVNSNFRDLKTFVNSTPAQIEYLANQYNTAKNKVISDLDNIGPLLG
NRIRAQLGKEVLPALDGALSLAGAMRETKEALENVSVSLEVLQEATNSLQVNLLNEQARL
NNTLNDPACSAPGVSSTCRDIRKTLSLLSINANFSALPNVDTELANVNNVLKTDLSNIVQ
KGYATFNDTPDLIKNQTTNIVSALPRIKSMLDDVGSNITSFSKQIPVQDTLANFTLYLSQ
SQSYVEDYYPVIDKYDFYRWMGCIIVCCMVTLILTFNFLGLLCGTCGYDKHASPTTRGFI
SNTGGNLLMAGVGFSFLFSWVLMLIVMIAFVVGGNVEKLVCEPFENRALFKVLDTPYLIN
PYWKNFLPGFLYQNPEIDLTFEKLYSNCKENKGIYTALQLDNIFNVSNYLNTSIYTRDVV
DVFEFVNVDLSGMVLLDANAKQNLLNFSDTGIVSIHYDAYLTEINKGVTKVDLLSFANDL
EAQADKLPKGALENALKGHASSIRFIHGQQVVPLEQAMSTLNHSIRLLQRTTFDLPNKVN
NVISAIDAAQNLITNNASLIIRQETKNYMEMMIGYFKQYLDWVKNSMMMEVAACKPVANI
VDTVEIVTCSFVVDSLNTFWFGLGCCTVFLIPSVIISVKLAKFLRRMDSEDVYDDIETIP
MKTLENW
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtaaagcagggttgctcttactgatgctgtgtggctgtacagtatgtggaagc
caaacttcaatgcaggaatcgccacagggaactttggattttgggtttgttccctctgga
gtttatgaaacgcatgcatattttgaacccggacctataggaatcctttttcacttagtg
cactctttcctttatgtggtgcagcccaatccttttcctcacgatctcgtcacaaaggtg
gcacagaagaagttgagagaggtcaaacaagaatataaaaagccagaaaacattgtgctg
acactccaggccatctactatgaaattggtttcattgtatgcgcttccctgggagtgctg
tttgttctgtttatgcctcttgtggggctttgcttctgcatgtgtcgttgctgtgacaac
tgcggaggagagatgcaccagagacagaagaagaatgctgactgccggagaggctgcttt
gtaacattgctctttgtgacgtctctcataatctcagctggtgttctgtgcgcgtactcc
gccaatcaaaatctatcgacccagctgaagggagtccggaagcttgttaatagcaatttc
agagatctgaaaacctttgtaaacagcactccagcgcaaatcgagtatctggctaaccag
tacaacactgccaagaacaaggtcatttctgacctagacaatataggtccattgcttggc
aataggattcgtgcacagttgggaaaagaagttctccctgcactagatggggctctaagt
ttggctggagccatgagagaaacgaaagaggctttggagaacgtgagcgtctcgctggag
gtgttgcaggaagcaaccaacagtctgcaggtgaacctgctcaacgagcaagcgaggctg
aacaacacactcaacgacccagcctgctccgcgccaggggtctcctccacctgccgtgac
atcaggaaaacactgagtctgctcagcatcaacgcaaacttcagcgcgttgcccaatgta
gacacagagttggcaaatgtgaataatgttcttaagaccgacttaagcaatattgttcaa
aagggatatgcaacgtttaacgacaccccagatctgataaagaaccaaactacaaatatt
gtgtcagctcttcctcgcatcaagtccatgctggatgacgtagggtctaacatcaccagc
ttctccaagcagatccctgttcaggacactcttgccaatttcaccctgtacctcagtcag
agccagtcatacgtggaggactactatcctgtgattgacaagtatgatttctacaggtgg
atggggtgcatcatagtctgctgcatggtgactcttatccttaccttcaacttcctgggc
ctgctgtgtggcacctgtgggtacgacaagcatgcctcccctaccaccaggggcttcatc
tccaacaccggcggcaacctgctcatggcaggtgttgggttcagctttctgttctcctgg
gtgctgatgctcatcgtaatgattgctttcgttgtgggaggaaatgttgagaagctggtc
tgtgagccttttgagaacagagctttgtttaaggttctggatactccctatttgataaat
ccatattggaagaacttcctgcccggcttcctctatcagaatcctgaaatagatctgacg
tttgaaaagctttatagtaactgcaaagagaataaaggcatctatacagcactacagctg
gataatattttcaacgtcagtaattatttaaacacaagcatttataccagggatgtggtt
gacgtgtttgaatttgtaaatgtggatctgagtggcatggtcctactcgatgccaatgca
aaacagaatcttctgaatttcagtgatactggcattgtgagcatccactatgatgcctac
ttaacagagatcaacaaaggtgttacaaaagtggatctgttgtcatttgctaatgacctg
gaagctcaggcagacaagctgccaaagggagcgctggagaatgcgttgaaaggtcacgca
agcagtattcgtttcattcatggtcaacaggtggtgccactggagcaagccatgagcact
ttaaatcacagcatccgtttactgcagaggactacatttgatctcccaaataaagtgaat
aatgtgatcagtgctattgatgcagcacaaaacctcatcaccaacaatgcatcgttaatt
attagacaggaaaccaaaaattacatggagatgatgatcggctactttaagcaatacctg
gactgggtcaaaaattctatgatgatggaagttgcagcgtgcaagcctgtggccaatata
gtagatacagttgaaattgttacctgcagctttgtagtggattccttgaacactttctgg
tttggtctgggatgctgcacagtatttttgatcccaagtgtaatcatttctgtgaagctt
gccaaattccttcgcagaatggactctgaggatgtgtatgatgacattgagactataccc
atgaaaactctggaaaattggtag
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