Polyodon spathula (Mississippi paddlefish): 121329889
Help
Entry
121329889 CDS
T07273
Name
(RefSeq) thyroid receptor-interacting protein 11-like
KO
K23368
thyroid receptor-interacting protein 11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121329889
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121329889
Retrieval pathways
121329889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
NPV_P10
Motif
Other DBs
NCBI-GeneID:
121329889
NCBI-ProteinID:
XP_041131811
LinkDB
All DBs
Position
17:complement(25379376..25398370)
Genome browser
AA seq
1975 aa
AA seq
DB search
MASWLGGIGTGLGQSLGQVGGSLSSFTGQISSFTKDILLEGTEEVGDAATELQHKELEAA
YITQKSEYERLKKIHMELEEKHEAAEIQIKQQSSEYRGQLQQKEVEISHLKARQNALQDQ
LHKLQTVAQSAQGDAAILCATSTPATFLSSDRPHPSFQDDDMDFGDVIWSQQEINRLSNE
VSKLQAEVAHWRTLSQTSKIQGPVSTDQGEIYKLQKTIKELKETMSQEIDEHQHELSALQ
DAHRHKLSEITCRHREELAEYEERIEELEEQLQPGGSSAGTPEHFKASEQQQTILAMEIE
LTSRKQRTEELEHKIKEITESLIAAEQERVVLLQEKENAQAETDTLMQTYKRLQNTVDEL
QTRVDDQTEKSMQKSLLENEINGLKKALVAAEKEIARLENLNRSKAEVEHADILELNTII
KTLKEEKEQLEKEKTILQERLENIKPQQTVEDNTGINEELRAELLEVKELSEKLQEKERL
LADCTMERDTLMAEVEELDKQNQEATQHLISVKDQLLQQRREADVTIDRLQSEMESTRKD
LVKLESQHKTMQMEVESQREQLSQSAFTLNDMHMSKQQVQETMKDLKQQLGKAEERSTDF
KKENTELKEQLQKAEEELSAAKLELSKSGDSTSDSGQQEQLLEQKEREISKLRQEISESK
TLHEKVLATNYELKMEVKKLQVDCKNAEGSLEIVTRQLRDAQSVKEKITMEKDTRLEALR
MEKVQLETELNQSEKRLMEQAKQYRQTIEELTRARNMNASALQTEHERLVKLNQQKDFEI
SELKQSIEQMEVDHQETKEMLTSSLSGQKQLTELIKEKDGFMEKFKERMTESQNKLETCT
KATKECEVLKHALEEKDKQLGVMKEENSHLKEEIDRLKDQQSRPQPIAEPKTLDIITELE
TEIAQLKTKKDGLEDEITALKKTMKEQKGSFQDSLQEQERELDQAKTMTFTYEKLILEKD
KEIVSLQESIDQIKMQFQMEMQVIHTDSVILQEDKSESLNRENGNEKHDLSKVEIDRLVN
GMKEKEIEMNLLNEKNLFLTKQLDQLVASKDEVGKLAQIVQQKDLEIQALRARVTSGTFT
QDGIYLQQQIQAYAVEREQVLAVLNEKTRENSQLKSEYHRLMDIVAAKETALLKLQEENQ
KMSTMNDIGSQDMVRETIQNLSRIIREKDIEIDALTQKCQTLLTVLQTSTSGQGSESSGV
SSNQFEELLQERNNLKQQVKKMEEWKQQVITTVRNMQHESAQLQEELIKLQSQVSSENDC
NSKLSVHYNSLIQGYEQKEKKLGSLSQELAQVQQSISQLSSTKDFLLEKLGLDLEVHIPE
VITPLMTATLSKGTILEENEGQVKRLHLELEHLRKVIEEKDTAIRTLQENNHRLSNSLAS
TSESEKKGQEAAASEIKQTKDRLDVLQKSLREKDLLIKSKGDQLNPLTESLRNKENDNEV
LKQAVTNLKERTLILEMDIHKLKEENDQIMVKSREKETEFRALQETNMQFSMLLREKEFE
SNSMREKASALEKMLKEREQGKSGELNQLLNEVKSMHEKAVKFQKERDQMMLALKQKQME
TTAIQNELQHLRDKEQRLAQELDRLRNHLIEMEDSYTREAVAAEDRETELRRKVTVLQEK
LDSSSSAVESASNQASMQVESLQEQLNIVVRQRDETLLQLNMSQEQVKQYALSLSNLQMV
LEQFQQEEKAMYSAELEKHKKEKAEWKRKAEKLGDSVSILQANLDEAKTALESASRLTDQ
LDLKEEQIEELNRQVSLRQEMLEDAQNKLMNLVNSTEGKVDKVLMRNLFVGHFHTPKNKQ
QEVLRLMGSVLGLKKEEMDELMEEGRGVTGWVSSWLGGRSAQSVPNTPLRPGHASVLNNS
FSELFVKFLEVESRPPPKLPVYDMKPLSAPPPGKHSSSTAASATGLPGANKRIDFNPFLA
PRSAAVPLMTTAAPGAGGTGHLLMKPISDALPTFTPLPVSADGSAGAVLKDLLKQ
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttggcttggtgggatcggtacggggcttggacagtcgctgggtcaggtcggt
gggagtctgtcatcgtttacaggccagatctctagctttaccaaagacattctcctggag
ggtacagaagaagttggggatgctgcaactgaactgcagcataaagagctagaagcagcc
tacatcacacagaaatcagagtatgaacgattgaaaaaaatccacatggagctagaggag
aagcatgaagccgcagagatccagataaaacaacagtcttctgagtacaggggtcaatta
cagcagaaagaggtggagataagccacctgaaagccaggcagaatgccctgcaggatcag
ctgcacaaactgcagacagttgcacagtctgctcagggtgatgctgccatattatgtgcc
acctccacgcccgccacctttctttctagtgatagacctcatccaagctttcaggatgat
gatatggactttggagatgtgatctggtctcagcaggagatcaaccgcctgtccaatgag
gtgtccaaactacaggcagaagttgctcactggaggactctgtcacagacctctaaaatt
caagggccagtcagtactgaccaaggtgagatctacaagctgcaaaaaactattaaggag
ttaaaagaaactatgagccaggaaattgatgaacaccagcatgagctctcagcattgcaa
gatgcacacaggcataaactgtcagagattacgtgccggcatcgagaggaacttgccgag
tatgaagagagaattgaagagttggaggagcagttacagccaggtggttccagcgcaggt
accccagaacatttcaaagcctcagagcagcagcagacaattctagctatggagattgaa
ttgacttccagaaaacagcgcacagaagaactggagcacaagataaaagagattactgaa
agcctcatcgctgctgagcaggagcgtgtcgtcttgcttcaagaaaaggaaaatgctcag
gctgagacagatacattaatgcagacttataaaagactgcagaacactgtagatgagctt
cagaccagagtggatgatcaaacagaaaaatctatgcaaaaatcacttctggaaaatgag
attaacggcttgaaaaaagcattagtagctgcagaaaaggaaatagcaaggctggaaaat
ctaaatcggtccaaagctgaagtagaacatgcagacattttagaattgaatacaataatt
aagaccttgaaggaagaaaaagaacagctagagaaagaaaagacaattctgcaggaacgt
cttgaaaacataaaacctcagcaaacggttgaggacaatactggaattaatgaagaactt
agagcagagttattggaagtgaaagaactgagtgaaaaactgcaagaaaaagaaagactg
ttggcagactgcaccatggaaagggacacactgatggcagaagtagaagaattagacaaa
cagaaccaagaggcaactcagcacctgatttcagtcaaggatcagctgttgcaacaacgt
agagaggcagatgttaccatagatcgattacaatcggaaatggagagcactagaaaggat
ctggtcaaacttgagtcacaacacaagacaatgcaaatggaggtagagtcacagcgtgaa
caactgagccagagtgcattcaccctgaatgatatgcacatgagtaaacagcaagtccag
gaaaccatgaaggacctcaaacagcaactggggaaagctgaagagcgcagcacagatttt
aagaaggagaacactgagctgaaggagcagctgcagaaagctgaagaggagctttctgca
gccaagctggagttatcaaagtctggtgacagcacttcagacagtgggcagcaggagcag
ctacttgaacaaaaggaaagagaaatttctaaattgaggcaagaaatttcagaaagcaaa
accttgcatgaaaaagtactggctacaaattatgagctcaaaatggaagtaaaaaagctg
caagtagattgcaagaatgctgaagggagtctagaaattgtgactcggcagcttagagat
gcacaatctgttaaagagaagatcaccatggaaaaagacactaggctggaagctttaaga
atggaaaaggtacaattggaaactgaactgaaccagtctgaaaagaggttaatggaacag
gccaaacaatatcgacaaactattgaggagcttacaagggcacggaacatgaatgcctct
gccttacaaacagagcatgagcgcctggttaaattgaaccagcagaaggactttgagata
tctgagctaaaacaaagcattgagcaaatggaagttgaccaccaagaaactaaagagatg
ctgacgtctagcttatctgggcagaaacagctgacagaattaatcaaagagaaggatggg
tttatggaaaagtttaaagaaaggatgacagaatctcaaaacaaactggagacgtgtacc
aaggcaactaaagaatgtgaggtccttaagcatgcccttgaagaaaaagataagcagctt
ggtgtgatgaaagaagaaaacagtcatctcaaagaggaaattgatcgtctgaaggaccag
cagagtagaccccaacccattgctgagcccaaaactctggatataataacagaactagag
actgagatcgcacaactcaaaacaaaaaaggatggcttagaagatgagataacggctcta
aagaagacaatgaaggagcaaaaaggaagctttcaggattccttgcaggaacaagaaagg
gagctggatcaggccaaaaccatgacttttacatatgagaaactcatcttggagaaggat
aaggagattgttagccttcaggagtccatagatcagatcaagatgcagtttcagatggaa
atgcaagtaatccacactgattcagttattctgcaggaagataagagtgagtcgttgaac
cgtgagaatgggaatgagaaacatgatttgtccaaagttgagattgacagacttgtcaat
gggatgaaggaaaaagaaatagagatgaatcttcttaatgagaagaacttgttcttgacc
aagcaattggatcagctggttgcctcaaaagatgaagttggtaaacttgctcagatcgtc
cagcagaaggacttggagatacaagctcttcgtgcaagggtcacctctggaaccttcact
caagatggtatctatctgcaacaacagatacaagcttatgcagtggaaagagaacaagta
ttggcagtattgaatgagaagactagagagaacagtcagctgaagtctgaatatcataga
ctcatggacattgtagctgccaaagaaactgcccttctgaagctccaagaagaaaatcaa
aagatgtctaccatgaatgatattggaagccaagatatggtgcgagagacgatccaaaat
ctttcaagaatcatcagggaaaaagacattgagatagatgccttgacacagaaatgccaa
accttgttgacagtccttcagacttccactagcggtcagggcagcgaatcaagcggtgtg
agcagtaatcagtttgaagagcttctccaggaacggaacaacttaaagcagcaggtgaag
aagatggaggaatggaagcagcaggttattaccactgtcaggaacatgcagcatgagtcg
gctcagctccaggaagagcttatcaaactacaaagccaggtctcatctgaaaacgactgc
aactctaaactgtctgtccattataacagcttgatccagggttatgagcagaaagagaag
aagctaggtagtctaagtcaggagcttgctcaggttcagcaaagtatcagtcagcttagt
agcaccaaggacttcctacttgaaaaactaggcctagatctagaggtgcacattccagaa
gtaataactcctttaatgacagctactttatccaaaggtacaattctggaagagaatgaa
ggacaggtaaaaaggctgcatcttgagctggaacatttgaggaaagttatagaggagaaa
gatacagctataaggactcttcaagaaaataatcatcggttgtctaactctttggcttct
acatctgaaagtgaaaaaaaaggacaagaagcagcagcatctgagatcaagcagacaaag
gatagactcgatgttcttcagaaatctttaagagaaaaagaccttcttatcaaatccaaa
ggtgaccagctgaatcctttgactgaaagtctgagaaacaaggaaaatgacaatgaagtg
ctgaaacaagcagtgaccaatctcaaagaacgaacgttgattttggaaatggacattcac
aagctaaaagaggagaatgaccaaataatggtgaagtccagagagaaagagactgagttc
agagccttgcaggagacaaacatgcagttttccatgcttttgagggagaaagagtttgag
tcaaattccatgagggaaaaggcatccgccttggagaaaatgctgaaagaaagggagcag
ggtaaatcgggtgaattaaaccagttgttgaatgaggtaaagtcaatgcatgaaaaggca
gtcaaattccaaaaagagagagaccaaatgatgctagctctaaagcagaagcagatggaa
acaactgctattcagaatgagttgcagcacttgcgtgacaaggagcagcggctagcacag
gagctggatcgtctgcgtaatcatctgatagagatggaggattcatacacccgggaggct
gttgctgcagaggaccgagagacagaattgaggagaaaggtcacagtcctacaagaaaag
ctagactcctcctccagtgctgtagaaagtgcaagcaaccaagcaagtatgcaagtggaa
tcattacaggagcaattaaacattgttgtacgtcagagagatgaaaccttactacagctg
aacatgtcacaagagcaagtgaaacagtatgcactgtcactctccaacctgcagatggtg
ctagaacaattccaacaagaggagaaagccatgtattcagcagaactggagaagcacaag
aaggaaaaggcagagtggaagaggaaagcagaaaaactgggggacagtgtgtcaatcctg
caggcgaatctggatgaagccaagacagccctggaatctgcatcaagactgactgatcag
ctggacctgaaagaagagcaaattgaggaattaaatagacaagtgagccttagacaggag
atgctggaagatgctcagaataagcttatgaatcttgtgaacagtactgaagggaaagta
gacaaagtcctaatgaggaacttgtttgttggtcactttcacactccaaagaacaagcaa
caggaggttctcaggttaatgggaagtgtgttgggactcaagaaagaagagatggatgag
ctgatggaagaaggtcgtggagttactggatgggtgtctagttggcttggtggccgaagt
gctcaaagtgtcccgaacacacctctgagaccagggcatgcatccgttttaaacaattct
ttctccgagttgtttgtaaagtttttggaagtagagtcgaggccaccaccgaagctgcct
gtgtatgacatgaagcctttgagtgcaccaccacctggcaagcattccagcagcacagca
gccagtgccacaggtcttcctggagcaaacaaaaggatagacttcaatccctttttggcc
ccacgttcagcagctgtgcctctcatgacaacagcagcccctggagcaggtgggactggc
catcttctgatgaagcccatctctgatgccttgcctacattcacacctttacctgtgtct
gctgatggcagtgctggggcagtgctgaaggacctcctcaaacagtga
DBGET
integrated database retrieval system
