Polyodon spathula (Mississippi paddlefish): 121329927
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Entry
121329927 CDS
T07273
Name
(RefSeq) putative E3 ubiquitin-protein ligase UBR7
KO
K11979
E3 ubiquitin-protein ligase UBR7 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121329927
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121329927
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
121329927
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-UBR
PHD
Motif
Other DBs
NCBI-GeneID:
121329927
NCBI-ProteinID:
XP_041131942
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Position
17:complement(25906281..25914768)
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AA seq
417 aa
AA seq
DB search
MAVNEGDEVVLSMVDVLEENEELENEATAVLGGSDPEKCSYPKGYVKRQALYACSTCTPK
GEDPAGICLACSYKCHEGHDLYELYTKRNFRCDCGNSKFKGFECKLYSGKDTLNTNNKYN
QNFIGLYCTCKRPYPDPEDEVSDEMIQCIVCEDWFHGRHLGAISTESVELQEMICVSCTN
RTPFLWAYAAHLSAPSVTVMSPIVADVDMSMEETEGKKGVKEETENKPPEPSAEETPTCK
NEGQQPSTSTASDQEPVVNGETACKRKLDQAETETCKLEKLKGKAFVQKNTAIYLPYNWR
SKLCTCQKCKKTYAESEVPFLLDESDTVLAYEKRGQSNQESDAESRDPLMAALSSMDRVQ
QLEMIYEYNDLKTELKDYLKRFADEGKVVTSEDIQDFFEQLRSRKKRRVDNDHHYYT
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcggtaaatgaaggagacgaggttgttctttctatggtggatgtcctagaggaaaac
gaagagttagagaatgaagccaccgctgtgctggggggcagtgatcctgagaaatgttcc
tatcccaagggctacgttaagagacaggccctctatgcctgcagtacctgcacaccgaaa
ggtgaggatccagcggggatatgcctagcctgctcctacaagtgtcacgaggggcatgac
ctctatgagctgtacaccaaaaggaactttcgttgtgattgtggcaacagcaagtttaaa
ggctttgagtgcaagctgtattctggaaaagacacattgaataccaataacaaatacaat
caaaacttcattggtttatactgcacctgcaaaaggccttatcctgatcctgaagacgag
gtttcagatgagatgatccagtgtattgtgtgtgaagactggttccatggcaggcatctt
ggtgccatctctacagagagtgtggagctccaggagatgatctgcgtgtcctgcacaaac
agaacccccttcctctgggcctatgcagcacacctatcagctccttctgtgactgtaatg
agccccatcgtggctgacgtggacatgagtatggaggagactgagggaaagaagggggtc
aaggaggagactgagaacaaaccccctgagccaagcgcagaggaaactcccacctgtaag
aatgaaggacagcagccttccaccagcactgcttctgaccaggagccggtcgtcaatgga
gagactgcctgtaaaaggaaattggatcaagcagagacagagacttgtaagctagagaaa
ctgaaaggaaaggcatttgtacagaaaaacactgccatctacttgccatacaactggcgc
agcaagctgtgtacctgccagaagtgcaagaaaacctatgcagaatctgaagtgcccttt
ctgctggatgagtcggacacagtgctggcctatgagaagagaggacagtccaatcaggag
agtgacgcagaaagcagagatcctcttatggcagctttgagcagcatggacagggtccag
caactggagatgatctatgagtacaacgacctgaagactgagctgaaggattatttgaag
aggtttgccgatgaaggcaaggtggtaaccagtgaggacatccaggacttttttgaacag
ctacggtccaggaagaaaagaagggttgataatgaccaccattactacacttga
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