Polyodon spathula (Mississippi paddlefish): 121329994
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Entry
121329994 CDS
T07273
Name
(RefSeq) sorting nexin-6-like
KO
K17920
sorting nexin-5/6/32
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121329994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121329994
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121329994
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Macropinocytosis
Sorting nexins
121329994
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121329994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
121329994
NCBI-ProteinID:
XP_041132110
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All DBs
Position
17:complement(28470357..28481859)
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AA seq
407 aa
AA seq
DB search
MMQEGLDDGPDFLSEEDRGPRAVNVDLQTDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHESFVENEEYAGYIIPPAPPRPDFDASREKLQKLGEGEGSVTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPVLRKDMNFHVFLEYNQDLSVRGKN
KKEKLEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDASAKSDKMIRSHK
NTADDVNRIASTLYTLGTQDSTDVGKFFLKISELFEKTRKIEARVAADKDLKLADLLKYY
LRESQAAKDLLYRRGRSLVDYENANKALDKARAKNKDVLQAETSQQICCQKFEKISEYAK
QELIDFKTRRVAAFRKNLVELAELELKHAKANLQLLQSSLGVLKGDA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggaagggttggacgacggccccgacttcctctctgaagaggatagaggaccc
agagccgtgaatgtggatcttcaaacagatgcaacccttcaagttgacatttctgatgct
ctgagtgaaagggacaaagtaaaatttactgttcacaccaagagtacattaccaaatttt
aaacaaaatgaattttctgttgttcgacaacatgaagagtttatctggcttcatgagtcc
tttgttgaaaacgaagaatatgcaggctatattatccctccagctccaccaaggcctgat
tttgatgcatcaagagaaaaactacagaaacttggggaaggagagggatcggtgactaag
gaggagttcacgaaaatgaaacaagaattggaggcagagtacttggccatattcaagaaa
actgtggcaatgcatgaagtgttcttgtgtcgtgtagcagcccatccagtcctaaggaag
gacatgaactttcatgtgttcttagaatataaccaagacctaagtgtacgaggcaaaaat
aagaaagagaagctggaagacttttttaaaaacgtggtcaagtctgcagatggagtgctt
gtggcaggtgtaaaagatgtagatgatttctttgaacatgagaaaaccttccttttagaa
tatcacaacagagttaaagatgcttcagccaagtcagataaaatgataagatctcataaa
aatactgcagatgacgttaatagaattgcctctacgttatacacactaggaactcaagac
tcaaccgatgtgggcaaatttttcttgaaaatatcagagttatttgaaaaaacccggaaa
atagaagcaagggtggctgcagacaaggatctaaaactggctgatttgctaaaatattac
ctgagggagtcgcaggctgcaaaggatctcctctaccgacgagggaggtcattggtcgat
tatgagaatgcaaacaaagctttggataaagcaagagccaaaaacaaagatgttcttcaa
gcagaaactagccagcaaatttgctgtcaaaaatttgaaaaaatatctgaatatgcaaaa
caagagcttatagactttaagaccagacgagttgctgctttcaggaaaaaccttgtagaa
ctggcagaattggaactcaagcatgccaaggctaatttacagctgttgcagagctctctt
ggggtcttgaaaggtgacgcataa
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