KEGG   Polyodon spathula (Mississippi paddlefish): 121329996
Entry
121329996         CDS       T07273                                 
Symbol
wdr1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pspa04990]
    121329996 (wdr1)
Domain-containing proteins not elsewhere classified [BR:pspa04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   121329996 (wdr1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd eIF2A WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_EIPR1 PEP5_VPS11_N Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_RIG_1st WD40_like Beta-prop_ELP1_2nd Beta-prop_ELP1_1st DUF5711 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 121329996
NCBI-ProteinID: XP_041132116
LinkDB
Position
2:10850551..10871104
AA seq 607 aa
MPYELKKVFASLPQVERGVAKVLGGDPKGNHFLYTNGKCVIIRNIENPAIADIYTEHAHQ
VSVAKYAPSGFYIASGDFSGKLRIWDTTQKEHLLKYEYQPFAGKIKDISWTEDSKRIAAV
GEGREKFGAVFLWDTGSSVGEITGHSKVINSVDVKQTRPYRIVTGSDDNCGAFFEGPPFK
FKFTMMDHSRFVNCVRFSPDGNRFASAGADGQIFIYDGKNGEKISALGGEKAHDGGIYAV
SWSPDSTLLLSASGDKKAKIWDVAKNSAVTTFNMGSDVLDQQLGCLWQKDNLLTVSLSGY
INYLDKNNPNRPLRTIKGHSKSIQCLTVHKTDGRSYIYSGSHDGHINYWDAETGENDAFS
GKGHSNLVSRMAVDESNQLVSCGMDDTVRFTSVTKKEYSASDLVKMDVQPKCVAVGPGGY
AVAVCIGQLVLLKDKKKGFGMDNLGYEPEAAAIHPGGVTVAVGGLDGKVHLYSIQGNTLK
DDGKTLEVKGPVTDLAYSHDGAYLAVCDANKAVTVFTVAGGYAEKGVFYGHHAKVVCVAW
SPDNEHFATGGMDMMISIWTVSNSDTRIKMPDTHRMHHVSSVAWLDEHTLITTSHDSSVK
QWTVTYK
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgccgtatgaacttaagaaagtgtttgccagtctgcctcaggtagaacggggagttgcg
aaggtccttggaggtgatccgaagggaaaccacttcctttacaccaacgggaagtgtgtc
atcatccgaaacattgaaaatccagcaattgcagatatctacactgagcatgctcaccaa
gtttctgttgctaagtatgctcccagtggattctacattgcatctggagatttctctggg
aagctgagaatctgggacaccactcaaaaggaacacctccttaagtatgaataccagccc
tttgcaggaaaaattaaggacatttcatggacagaagatagcaagagaatagcagcagtt
ggagaagggcgggagaagtttggagcagtgtttctgtgggacacaggctcatcagttggc
gagatcactggtcacagcaaggtcattaacagtgtggatgtaaaacaaacgcgaccctac
cgcattgtaactggcagcgatgataactgtggagcattctttgagggacctccatttaag
tttaagtttacaatgatggaccacagccgctttgtgaactgtgtgagattttcccctgat
ggaaacagatttgcttcagctggtgctgatggccagatcttcatctatgatggaaaaaat
ggagagaagatctctgctcttggtggtgaaaaggcccatgatggaggtatatatgctgtt
agttggagtcctgacagcactctgctgctttctgcttctggagacaagaaggctaagatc
tgggatgtagctaagaactctgcagtgaccacattcaatatgggatcagatgttttggat
cagcagttgggctgcctctggcagaaggacaacttgctgaccgtttctctgtctggttat
atcaactaccttgacaaaaacaatccaaacaggcctttgcgcaccatcaagggccacagc
aaatccatccagtgtctgaccgtgcataaaaccgatggacgatcatacatctactctgga
agtcatgacggtcatatcaattactgggatgctgaaaccggagagaatgatgcctttagt
ggaaagggccacagtaacctggtgtccaggatggctgtagatgaatcaaaccagctggtc
agttgtggtatggatgatacagttcgtttcaccagtgtgactaagaaagaatacagtgct
tcagaccttgttaaaatggatgtccagcccaagtgtgtcgcagtgggaccaggaggttat
gcggtagctgtttgcattgggcagcttgtactgctaaaggataagaagaaaggctttgga
atggataaccttggttatgagccagaagctgcagctattcacccaggaggtgtgacggta
gcagtgggaggattggatggcaaagtccacttgtattccattcaaggaaacaccctgaag
gacgatggaaagaccttggaggttaaggggcctgtgactgaccttgcctattcccacgac
ggtgcttacctcgcggtctgtgatgcaaacaaagctgttactgtcttcactgtggctggt
ggatatgcagagaaaggtgtcttctatggccaccatgctaaagtggtctgcgttgcttgg
tctccagacaatgaacattttgccactggaggcatggatatgatgatctctatctggact
gtaagcaactcagacacaagaatcaagatgccagatacccacaggatgcaccacgtcagc
agcgtggcctggttagacgagcacactcttatcacaacatcccatgactcctctgtcaag
cagtggactgtcacatacaaataa

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