Polyodon spathula (Mississippi paddlefish): 121330028
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Entry
121330028 CDS
T07273
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121330028 (scfd1)
Membrane trafficking [BR:
pspa04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121330028 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121330028 (scfd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
121330028
NCBI-ProteinID:
XP_041132183
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All DBs
Position
17:27830969..27863554
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AA seq
632 aa
AA seq
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MAASVREKQAAALKRMLNFNVPPVKNSASEPVWKVLIYDRFGQDIISPLLAVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALGANAVNQVTKVFDQYLNFITLEDDMFVLCNQNKELISYHAINRSDIMDTDMEIII
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDTVGAGQ
FSFQRPLLVLVDRNLDLATPLHHTWTYQALVHDVLDFHLNRVDMEESTGPENSPAGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAESVQQELDTYRAQEDEVKHLKSIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISSLQPPSEFDLEQYKKALTDAGCNLSPL
NYIKQWKAFAKMAAGPTNYGNSGTKTMGLFSRVMNSGSQFVMEGVKNLVLKQQNLPVTRI
LDSLMVMKSNPETDDYRYFDPKMLRGSESSVPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
TKAKPGKHVLYGCSELFNASQFLKQLSLLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtccgtcagagaaaagcaggcagctgctttgaagcggatgctaaattttaat
gtccctccagtgaaaaacagtgcatcggagccagtatggaaggtgctaatttatgacaga
tttggtcaggatatcatctcaccactgcttgcagtgaaagagttgagagacatggggatc
acactgcacctcctgttgcactctgatagagaccccatcccagatgtgccagccatttat
tttgttatgccaacggaagaaaatattgacaggatatgtcaggaccttcggaatcagctt
tatgaatcttactacttgaactttatatctgcaatttcaagaagtaaattggaagatatt
gcaagtgcggccttgggagctaatgcagtaaaccaggttacgaaggtttttgatcagtat
ctgaactttattacactggaagatgatatgtttgtactttgcaaccaaaacaaagagctc
atctcgtaccatgccatcaacagatcggatatcatggacacagacatggagatcatcata
gacacaatagttgacagtctcttctgcttttttgttacattaggtgctgttcccataata
agatgtccaagggggaacgctgctgaaatggtagcagtgaaactggataagaagctccgt
gaaaacctaagagatgcgagaaacagcctttttactggggacaccgtcggagctggacaa
ttcagcttccaaagacctttgttagttcttgtggacagaaacctagatttggccacccca
ctgcaccatacatggacatatcaggccttggtacatgatgttttggatttccatttgaac
agagtggacatggaagagtccactggtcctgaaaactcaccagctggtgcaagaccaaag
aaaaagaacaagaaaagctatgacttgacagctgctgacaagttttggcaaaaacataag
ggcagccctttcccagaagtagcagagtccgtacagcaggaattggatacatacagggcc
caagaggatgaggttaagcatcttaaaagcatcatggggctagaaggagaggatgaagga
gcaatcagtatgttatctgataacacagcaaagcttacctctgcagtaagttcccttcca
gagttgcttgagaaaaagagacttattgatcttcatacaaatgttgcaacagctgtgtta
gaacatattaagagccgcaaacttgatgtttactttgagtatgaagaaaaactgatgagc
aaatctacactggacaagtctttactggacatgatcagtgacccagatgcgggcactcct
gaggataagatgagactgtttctgatctattacatcagttcactacagccaccctcggag
tttgacctggaacagtacaaaaaagcattaactgatgctggatgtaacctttctccttta
aactacatcaaacaatggaaagcttttgccaaaatggctgcagggccaactaactacggc
aacagtggaactaaaacaatgggtctgttttcaagggtaatgaattcaggctcccagttt
gtgatggaaggagtgaagaatctagtattgaagcaacaaaatttgccagtgactcgtatc
ctggacagcctcatggtcatgaagtccaaccctgaaacggatgactacagatattttgat
cccaaaatgcttcgtggcagtgaaagttctgtcccaagaaacaagaatccattccaagag
gcaattgtatttgtggttggtggaggaaattacattgaatatcagaatcttgttgattat
actaaggcaaaacccggaaaacatgtgctatatggatgcagtgaactcttcaatgcctcc
cagtttctaaaacagttgtcgctgcttgggcagaaatag
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