Polyodon spathula (Mississippi paddlefish): 121330040
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Entry
121330040 CDS
T07273
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015
mRNA surveillance pathway
pspa04110
Cell cycle
pspa04114
Oocyte meiosis
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121330040
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121330040
04114 Oocyte meiosis
121330040
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121330040
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121330040
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121330040
03036 Chromosome and associated proteins [BR:
pspa03036
]
121330040
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121330040
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121330040
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121330040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
121330040
NCBI-ProteinID:
XP_041132208
LinkDB
All DBs
Position
17:complement(33883590..33898491)
Genome browser
AA seq
467 aa
AA seq
DB search
MSSAATTPPSVDKVDGFSRKSVRKAKQKRSQSSSQFRSQGKAIELTPLPLLKDVPAAEQP
ELFLKKLQQCSFIFDFMDTLSDLKMKEYKRSTLNELVDYVTVSRGYLTEQAYPEVVRTVS
YNIFRTLPPSDSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKF
VLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAE
LLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPALTE
PVIRGLLKFWPKTCSQKEVMYLGELEEILDVIEPSQFVKIQEPLFKQISRCVSSPHFQVA
ERALYYWNNEYIMSLIEENSNVILPIMFASLYRISKEHWNPAIVALVYNVLKSFMEMNST
LFDDLTATYKSDRQREKKKEKEREELWKKLEDLELKRGLRSDGIIPT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggcagccacaactcctccatcagtggacaaagtagacggattttctcggaag
tccgtcagaaaggccaaacagaagaggtctcagagctcttcacagttcagatctcagggc
aaagctatagagttaacacctctgcctctgcttaaagacgttccagccgcagagcagccg
gagctgttcctgaagaaactccagcagtgcagcttcatctttgacttcatggatacttta
tcagatctcaagatgaaagagtacaaacgctccaccttgaacgagcttgtggactatgtc
acggtcagcaggggttacttgaccgaacaggcataccccgaagtagtaagaacggtttct
tacaatatattcaggaccctccctcccagcgacagtaatgaatttgatccagaagaggat
gagccgactcttgaagcctcttggccacatttacagcttgtatatgaatttttcatacga
tttttggagagtcaagaattccagcccagcattgccaaaaaatatatagaccagaaattt
gtactacagcttttggaactgttcgacagcgaggacccacgggaacgagactacctgaag
acagtcttgcacagaatttatggaaagtttcttggtcttagagcttttatacgaaaacag
atcaataatatttttctacgttttgtttatgaaaccgagcacttcaatggggtagcagag
cttctggagatactgggaagcataatcaatggctttgctttgcctctgaaggctgagcac
aaacagttcctggtgaaagtcctgatccccctgcacactgttaggagtttatcactcttt
cacgcacagttagcatattgtattgtacagtttctagagaaagacccagcattaacggaa
ccagttatcagaggcttactaaaattctggccgaaaacctgcagtcaaaaagaggtcatg
tatcttggagagctagaggagatcttggatgtgatcgaaccatcccaatttgtaaaaatt
caagaaccactgttcaaacagatctccagatgtgtgtccagcccgcatttccaggttgct
gaaagggcactgtattactggaacaatgaatatatcatgagtttgatagaggagaactcg
aacgtcatcctgcccataatgttcgctagcctttataggatctccaaagagcactggaat
ccggcaatagttgcattagtctacaacgtactcaagtcttttatggaaatgaacagtacc
ctgtttgatgatctaacagcaacctacaagtctgatcgtcagcgagagaagaaaaaggag
aaagaacgggaagaactgtggaaaaagcttgaggatctagagttgaagagaggtctgaga
agcgacgggataatccccacttaa
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