Polyodon spathula (Mississippi paddlefish): 121330058
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Entry
121330058 CDS
T07273
Symbol
stx18
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121330058 (stx18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121330058 (stx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121330058 (stx18)
Membrane trafficking [BR:
pspa04131
]
SNARE
Syntaxin (Qa)
Stx-rER
121330058 (stx18)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
121330058
NCBI-ProteinID:
XP_041132254
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Position
2:complement(11186380..11234872)
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AA seq
331 aa
AA seq
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MVVDITLLFKASVKTVKTRNKAIGVCFDSAKDEILKKSRPKGDFSSRAKEVIANITKLKD
FLLEHRKDYINAGSLISSDYSHMTDNDRDQIDQDAQIFMRACSDAIRQLRSEAERKVFSA
QVKEHRGAVLDLTEVYLKSVCKLYSEQRAIRVKRVVDKKRLSRLEPEQNKKRLASTTLER
TTKSSTEQTDEKVMTSESSDKNTTDVQESSFGLWEDGKVEDELSPEEIQMFEQENQRLVG
EMNNLVDEVRQIEGKVVEISRLQEIFAEKVLQQESEIDNIHELVVGATENVKEGNEDIRE
AIKNNAGFRVWILFFLVMCSFSLLFLDWYGS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggttgttgatattactttattgttcaaagccagcgtaaaaactgtcaaaacaagaaac
aaagcaatcggagtgtgcttcgattcagcaaaagacgaaatcttaaagaaaagcagacca
aagggtgacttctccagcagagctaaggaagtgattgccaacatcactaaattgaaagat
tttctcttggagcaccggaaagattacatcaacgctggcagccttatctcttcagactat
tctcatatgacagataatgaccgggatcagattgaccaagatgcacagatattcatgaga
gcatgttccgatgccattcgtcagctgagatcagaagctgaaagaaaagtcttctccgct
caggtgaaagaacatagaggagctgttttggaccttacagaagtttacctaaaaagtgta
tgcaagctttactcggagcagcgagcgatcagggtcaaaagagtggtggataaaaagagg
ctgtcaagacttgaacctgagcaaaataagaaacggttggcttccacgactctcgaaaga
accacaaagtcctctacagagcagactgatgaaaaggttatgaccagtgaaagcagcgac
aaaaacactacagatgtgcaagagtccagttttggcctctgggaagatgggaaagtggag
gatgagctttcaccagaagaaattcagatgtttgaacaagagaaccaaaggcttgttggt
gaaatgaacaacctagtggatgaagtcaggcaaatagaaggcaaagttgttgaaatctct
agactgcaggagatatttgcagaaaaggttctacaacaggagtctgagattgacaatatt
cacgagttggtcgtgggtgcaacagagaacgtcaaagaaggcaatgaagacattagagag
gcgattaaaaacaatgccgggttccgtgtgtggattcttttcttcctcgtcatgtgttcc
ttttccttgctgttcctggactggtatggcagctaa
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