Polyodon spathula (Mississippi paddlefish): 121330086
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Entry
121330086 CDS
T07273
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121330086 (msx1a)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121330086 (msx1a)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
121330086
NCBI-ProteinID:
XP_041132292
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All DBs
Position
2:11365736..11367737
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AA seq
270 aa
AA seq
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MTSLTIGLKTEEASRVVLNRSEMQTNLKMAGGEEMEKPKVAILPFSVEALMADKKPTREV
SSSEVTAIAGASHTCSPRMGALSGPEINSPFSVAGLIKMPEDAIVKSESPDRQEHNSWIQ
SSRFSPPPPRHLSPPACPLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSN
SLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAFGISFPLGGQVPATSLYG
APHPFHRQSLPMSPVGLYAAHVGYSMYHLA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgacttcattaacgatcggcttaaaaactgaagaggcttcacgtgttgttttgaacaga
agtgaaatgcaaactaacctgaaaatggcaggcggcgaggagatggagaagccaaaagtt
gctatacttccatttagtgttgaagctttgatggcagataaaaaacctaccagagaagta
tcgagttccgaagtgacagctattgcaggagcgtcgcatacgtgcagtcccagaatgggt
gcgctaagtggcccagagatcaactctccattctcggtagcaggactaatcaaaatgcca
gaggatgcaattgtcaaatctgagagccccgacaggcaagaacacaattcatggatacaa
agttccaggttctcacctcctccgccaagacacctgagtccccctgcttgtcccctgaga
aagcacaaaaccaacaggaaaccccggactccctttaccacttctcagctgttggccttg
gagaggaaattccgtcagaaacagtacctgtcaatcgcggagcgagcagaattctccaac
tctctaaatctgacggaaacacaggttaaaatctggttccaaaaccggagagcgaaagca
aagagattgcaagaagccgagctagagaaattgaaaatggcagccaaacctatgttgccg
cccgcttttgggatttcctttccacttggtggacaggtccctgcgacctcgctttacgga
gcaccacatcccttccacagacaatcactgcccatgtcacccgttggactttatgccgct
catgttggatacagcatgtatcacctggcctga
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