Polyodon spathula (Mississippi paddlefish): 121330097
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Entry
121330097 CDS
T07273
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 2-like
KO
K03260
translation initiation factor 4G
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121330097
03012 Translation factors [BR:
pspa03012
]
121330097
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121330097
mRNA cycle factors
Stress granule specific factors
121330097
Translation factors [BR:
pspa03012
]
Eukaryotic type
Initiation factors
eIF-4
121330097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
W2
MA3
Motif
Other DBs
NCBI-GeneID:
121330097
NCBI-ProteinID:
XP_041132304
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All DBs
Position
17:5768157..5779299
Genome browser
AA seq
937 aa
AA seq
DB search
MYRKTSDEFVGKTSFSPPHPLKIILLKILRCQAAKVESVIAEGGASRFSASSGGGGGRGA
PQHYPKTVGNSEYLGKAPGPSVQRWTPSRSTRRDVNSSNEKERHDAIFRKVRGILNKLTP
EKFDKLCLELLNVGVDTKLVLKAIILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPS
PEVQSAQKQSTTFRRLLISKLQDEFENRTRNVEIYDKHDNPLTADEEEQRAIAKIKMLGN
IKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECLCQIMRTVGPRLDHEKA
KSLMDQYFARMKSLMTHKELPARIRFLLQDTLELRENNWVPRKAFIDNGPKTIIQIRQEA
VKDLGVFIPTNMSQGMRTDFFLEGPFMAPRMKLDRETLGGLADMFGQMPGSGIGTGPGVI
QDRFSPTMGRHRSNQLFNGHGGHIVPAPQSQFEMGGKSFMKSNQGQNQHYHAQNQGHPSQ
QQAPSKDMQPRFIKKGQLNADEISLRPAQSFLINKNQVPKLQPQIPTMIPPSAQPPRTQT
PPLGQPPQLGLKTNPPPIQEKPAKNNKKPPAKEELLKMTETIVTEYLNSKIINDAVNGVR
EMKAPKHFLPEMLSKIIICSLDRTDDDKEHASTLIHSLRHEGLISGDNFMQAFLNVLDQC
PKLEVDIPLVKSYLAQFAARAIIAELVNIAELAQPLENGTHFPLFLLCLQQTAKLRDREW
LTDLFQQSKVNMQKMLPEIDQNKDRMLEILDGKGLGFLFPLLKLEKELLKQIKADPSPQA
IYKWIKDNISPKLHTDKGFVNILMTSFLQYISHEMCLSEGDEQLDAPSKEQLDQEKQLLL
AFKPVMQKFLHDHVDLQVSALYALQVHCSNSSFPKGMLLRYFVHFYDMEIIEEEAFLAWK
EDISQEFPGKGKALFQVNQWLTWLETAEEEESDDDAD
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcaaaacaagtgatgagtttgtcggtaaaacttcgttttccccaccccaccct
ttgaaaattattcttttgaagattcttcgttgtcaagccgccaaagtggagagtgtgatt
gcagaagggggtgcttctcgtttcagtgcttcttcgggcggtggaggaggtaggggtgcg
cctcagcactatcccaagactgtcggcaacagcgagtacctggggaaagccccagggcct
agcgttcagagatggactccttcacgaagcactagacgagatgtcaactcctccaacgaa
aaagaacggcacgatgcaatctttaggaaagtcagaggcatattaaacaagctcacccca
gaaaagtttgataagctatgccttgagctcctgaatgtgggcgtagatactaaactcgtc
ctaaaagccatcatcttgctgattgtagacaaagcccttgaagagcccaagtatagctcg
ctatatgctcagctatgtctgcgcttggcagaagacgcaccgaactttgatggcccgtca
ccagaggtccagtcagctcaaaagcaaagcacgacattcaggagacttttaatttctaag
cttcaagatgaattcgaaaatcgtaccagaaatgttgaaatctatgacaaacatgacaac
cctctcacagctgatgaagaggagcagcgtgcaattgccaagatcaagatgctgggcaac
atcaaatttattggagaacttggcaaacttgatcttatccatgaatctatccttcataag
tgcatcaaaacacttttggaaaagaagaagagagtacaacttaaggatatgggagaggat
ttggagtgcctctgtcagataatgagaacagtgggacctagattagaccatgaaaaagcc
aagtctttaatggatcagtactttgcccgtatgaaatccttaatgacacacaaggaatta
ccagcaaggattcgtttcctgctgcaggatactttggagttgcgagaaaacaactgggtt
cctcgcaaagcttttattgataatggaccaaagacgattatccagattcgtcaggaggca
gtaaaggatttgggtgtttttattcccacaaatatgtcacaaggaatgaggactgacttc
tttctggagggaccgtttatggcacccaggatgaaacttgacagagaaactcttggagga
cttgctgatatgtttgggcagatgccaggcagtgggattggcactggtccaggagttatt
caagataggttttcacccacaatgggacgtcatcgttcaaaccaactttttaatggccat
ggtggacacattgtgcctgctcctcagtcccagtttgaaatggggggaaaatcttttatg
aaatcaaaccaggggcagaaccagcattatcatgcccagaaccagggacatccatcccag
cagcaagctccgtccaaggacatgcagcctcggttcataaagaaaggacagttaaatgca
gatgagatcagtctaagacctgcccagtcattcctaattaataaaaatcaagtgccaaag
ttgcagccgcaaataccaactatgattccaccaagcgcccaacctcctcgaacacagaca
ccaccattgggacagccacctcagcttggtctcaaaactaacccacctccaatccaggag
aagcctgcaaagaataataagaagcctcctgcaaaagaagaactacttaaaatgactgag
actattgtaacagagtacctgaacagtaaaattataaatgatgctgttaatggtgtgaga
gagatgaaagctccaaaacacttcctgcctgagatgttgagcaaaattattatttgttca
cttgatcgaactgacgatgataaagaacatgccagcactctgatccattccctcagacat
gagggactgatcagtggagataacttcatgcaggccttcctaaatgttctggaccagtgt
cccaagttagaggtggacatccctcttgtgaagtcttacttggcccagtttgctgcccgt
gctattattgctgagcttgtgaatatagctgagttggcccagcctctagagaatggcacc
cattttcccctcttcctactctgtcttcagcaaactgccaagttgagggatcgggagtgg
ctcactgacctgttccagcaaagcaaggttaacatgcagaagatgctgccagagattgac
cagaataaggatcgtatgttggaaattttagacggaaaaggacttggttttctgttcccg
cttctgaaactggagaaggagctattgaagcaaatcaaggcagacccatcacctcaggcc
atctataagtggatcaaagataacatttcacccaaactccacactgataagggttttgtc
aatatactgatgaccagctttttgcagtacatttcccatgagatgtgtctatcagaggga
gatgagcaattagatgctccttcaaaagagcaactggaccaggagaaacagctgctgctt
gcctttaagccagtaatgcagaagtttctgcatgatcatgtagatctgcaggtcagtgca
ctgtatgcactacaagttcactgcagcaacagcagttttccaaaaggcatgttgctacgt
tattttgtccacttctatgacatggagataatcgaagaagaagccttccttgcttggaaa
gaagatatttctcaagagtttcctggaaagggtaaagcattattccaggtgaaccagtgg
ctaacctggctggaaactgcagaggaagaagaatctgatgatgatgctgattga
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