Polyodon spathula (Mississippi paddlefish): 121330114
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Entry
121330114 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: RNA cytidine acetyltransferase-like
KO
K14521
N-acetyltransferase 10 [EC:2.3.1.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121330114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121330114
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
90S particles
Other 90S particles
121330114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GNAT_acetyltr_2
tRNA_bind_2
Helicase_RecD
TmcA_N
Acetyltransf_1
Acetyltransf_7
Focal_AT
Ndc80_HEC
Motif
Other DBs
NCBI-GeneID:
121330114
NCBI-ProteinID:
XP_041132324
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All DBs
Position
17:8574157..8593016
Genome browser
AA seq
1042 aa
AA seq
DB search
MFPNICEPFKKTKKSRLSQRHLYFWVLPYTGTVRVTETRAPCEFSEGKWHHSVHFYFIVA
NYSFFQLPWTITMFRKKVDNRIRVQIENGVAEQHRTLFVVVGNHGRDQVVILHHMLSKAT
VKARPSVLWCYKKELGFSSHRKKRMRQLQKKIKSGTLNINEDDPFELFVAATNIRYCYYN
ETHKILGNTFGMCVLQDFEALTPNLLARTVETVRNLLCWDPVSCSWLRSFTTWVTDASAQ
HVYQFPGSGLLLTLSSKLLWIQPSAQMLIGANPSSLLLYSGSCCGTINKNMAKQNKQTFV
QAWLLFCRLTNSCYEFVSPHSYSNIFVTSPSPDNLHTLFEFIFKGFDALEYQEHLDYEII
QSLNPEFNKAVVRVNIFKEHRQTIQYIHPGDAVKLGQAELLVIDEAAAIPLPLVRKLLGP
YLVFMASTINGYEGTGRSLSLKLIQQLRQQSAESQLSLTAENKTTSTARLTSARSLHEVT
LHESIRYAPGDAVEKXLNNLLCLDCLSIPRIISGCPLPQTCELYYVNRDTLFCYHRASEA
FLQKLMALYVASHYKNSPNDLQMLSDAPAHHLFCLLPPVPTTQNSLPEVLVVIQVCLEGE
ISRQSILNSLSRGKKASGDLIPWTISEQFQDPEFGSLSGGRIIRIAVHPDYQGMGYGSRA
MQLVQMYFEGQFPCLEENALQTASEFTHVNSEAVSLLEEVVSPRKDLPPLLLKLSERPAE
RLDYLGVSYGLTPPLLKFWKRAGFVPVYLRQTQNDLTGENTCIMLKELNSEGASQQSNWL
PAFWKDFRKRFLTLLSYQFSSFPPALALNILQNKNAKQDPDPLLSRAQLDADFTAYDLKR
LDMYSRNMVDYHLIMDMIPSIAKMFFLKQLGDISLSAAQSALLLGIGLQHKTVDQLETEI
ELPSSQLMGLFNSFIRKVVQVFTSIQEKAVEEQMVASKEIVMEPTIKTLTEDLDEAAQEF
QAKHKKELEKIKEMDLTQYMIRGDDEEWNAVLNKAGQSAALVTLKSNKKRKLLDAPEKEE
PRQNKKLKNKEKNKTKRGKFKK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgttcccaaatatctgtgaaccgtttaaaaaaacaaaaaaaagcaggctatcacagagg
catctctatttctgggtccttccttatacagggaccgttcgtgtgactgagactagagcc
ccatgtgagttcagcgagggcaagtggcatcattcagttcatttttacttcattgttgct
aattacagtttttttcagctcccctggaccattacaatgtttaggaagaaggtggacaat
cggatccgagtgcagattgagaatggagtggcggagcagcatcgcacactgtttgtggtg
gtgggaaatcatgggagggatcaggtggtgattctgcaccacatgctgtccaaggcgact
gtgaaagccagaccctctgtcctgtggtgctataagaaggagctgggattcagcagtcac
cgcaagaagagaatgaggcagctccagaagaagatcaagagcgggaccctgaacatcaac
gaggacgaccccttcgagctgtttgtcgctgccactaacatccgctactgttactacaac
gagacgcacaagatcctgggcaacaccttcggcatgtgtgtcttacaggactttgaggcc
ttgactcccaatctcctggcccggaccgttgaaacagttcggaacctgctttgttgggac
ccggtgtcatgcagttggctacgcagtttcacgacctgggtgacagacgcaagtgcacaa
cacgtgtatcaatttcccgggagcggcttgttactgacgctttcatccaagcttctctgg
attcaaccatcggcccaaatgttgattggagcaaatccctcctcattgctgctgtattct
ggttcatgttgcggcacaatcaacaaaaatatggctaaacagaataaacaaaccttcgtg
caggcgtggctgttattttgtaggcttacgaacagctgttatgaatttgtctctcctcac
agctactccaacatctttgtgacgtcccccagccctgacaacctgcacaccctctttgag
ttcatcttcaagggctttgacgctcttgagtaccaggagcacttggactatgaaattatc
cagtctttaaaccctgaatttaacaaagctgtggtccgcgtcaacatctttaaggagcac
agacagaccattcagtatatccacccaggggacgcggtgaaactgggccaggcagaactg
cttgtcatagatgaggcagctgccattcccttaccgctggtcaggaagcttttgggtccc
tacctcgtcttcatggcttccaccatcaatggctatgagggtactgggcgctctctctcc
ctcaaactgattcagcagctaagacagcagagtgctgagagccagctcagcctgaccgcc
gagaacaaaaccacctccacagcccgcctcacatcggcgcgctctcttcacgaagtgact
ctgcacgagtcgatccgctacgcccctggtgacgcagtggagaagtagctcaacaacctg
ctgtgcctggactgcctcagcatcccccgcatcatctccggctgccccctgcctcagacc
tgtgagctatactatgtaaacagggacacactgttctgttaccacagagcctcagaggcc
ttcctgcagaagctaatggctctctatgtggcttctcattacaagaactctcccaacgac
ctccagatgctttccgatgcccccgcccaccacctcttctgtctgctccctcccgtcccc
acaacccaaaactccctgcccgaggtgctcgttgtaatacaggtgtgtttggagggagag
atctctcggcagtccatcttgaacagcctttcacgagggaagaaagcttctggggacctc
atcccctggaccatctctgaacagttccaggatccggagtttggtagcttgtctggaggg
aggatcattcgcatagcagtgcatccagactaccaggggatgggctatgggagcagagcc
atgcagctggtccagatgtactttgagggtcagttcccctgcctggaggagaatgccttg
cagacagccagtgaattcactcacgtcaacagtgaggctgtgagtctgctagaagaggtg
gtatcaccccggaaggacctgccccctctgctcttgaagctgagcgagcgtccagcggag
agactggactaccttggggtctcctacgggctcacccccccgctgctcaaattttggaag
cgtgcaggttttgtcccagtgtatctaaggcagacccagaatgacctgactggggagaac
acctgcatcatgctgaaggagctgaactcagaaggggcatctcagcagagcaactggctc
cctgccttctggaaagattttcgcaagcggttcctgacactgctgtcctaccagttcagc
agtttcccccctgcgctggcactcaacatcctgcagaacaagaatgcgaagcaggaccca
gatcctcttctgagccgtgctcagcttgatgctgacttcactgcctacgacctgaagcgc
ttggatatgtattccaggaacatggtggactaccatcttatcatggacatgatccccagc
atcgccaaaatgttcttcctgaagcagctcggagatatctcgctgtccgcagcgcaatca
gctctgctgttgggcatcggtctgcagcacaagactgtggaccagctggagacggagatt
gagcttccgagtagccagttaatggggctcttcaacagcttcatccgcaaagtggtccag
gtgttcaccagcattcaagagaaagctgtggaggagcagatggtggcttccaaagagata
gtgatggaacccacgataaaaacactcactgaggatctggatgaagctgcccaggagttc
caggcaaagcacaagaaggagttggagaagatcaaagagatggacctcacacagtatatg
attcgtggagacgatgaggaatggaatgctgttttgaacaaggcagggcagagcgcagcc
ttggtcaccctaaaaagcaataagaagagaaagctgctggatgctcccgagaaggaagag
cctcggcagaacaagaaactgaagaacaaggagaagaacaagacaaagagaggcaaattc
aagaagtga
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