Polyodon spathula (Mississippi paddlefish): 121330122
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Entry
121330122 CDS
T07273
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B-like isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121330122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121330122
Membrane trafficking [BR:
pspa04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
121330122
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Fusion_gly
DUF3958
ZMYND11_CC
Motif
Other DBs
NCBI-GeneID:
121330122
NCBI-ProteinID:
XP_041132342
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All DBs
Position
17:complement(18673467..18689821)
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AA seq
225 aa
AA seq
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MSSEEFEKLHEMYKHIYNDLKSMPEIAAKCRGEEKKRVVREFDEKSGEAEEVLKGMDEEL
LLAPSSFRNPMSTKMRMYRRDLGKLQRDMKSTDLGLGFGARGESRYSTYTAENERSTQLQ
SQRALILQGTESLSRATQSIERSHRIAAETDQIGTDIIEELGEQREQLDRTRDRLVNTGE
NLSRSRRVLRSMSRRLMTNKLLLSVIIIMELAILGAVVYLKFFRK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagaggagttcgaaaagctgcacgagatgtataaacatatttacaatgacctg
aagtcgatgccggagatagcagcaaaatgtcgcggagaggaaaagaagagagtcgtcaga
gagtttgatgaaaaaagcggagaagcagaggaagtgctcaaaggaatggatgaagagttg
ctcttggccccgtcctccttccgtaacccgatgtccactaagatgcgcatgtacaggagg
gacttgggcaagctgcagagggacatgaagagcactgacctgggcctggggttcggggct
cggggggagtccagatacagcacctacactgccgagaacgagcgcagcacacagctgcag
tcccagcgagctctgatcctccagggcacagagtccctgagccgagccacacagagtata
gagcgctcacatcgcatagcagccgagaccgaccagatcggcacagacatcatcgaggag
ctgggggagcagagggagcagctggaccgcacccgagacagacttgtaaatactggtgaa
aacctcagtcggagccgaagggtcctgcgctccatgtccaggagactcatgacaaacaag
ctactgctgtctgttatcatcatcatggagctggccatcttgggagcagttgtgtacctc
aagttcttccggaagtga
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