Polyodon spathula (Mississippi paddlefish): 121330150
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Entry
121330150 CDS
T07273
Name
(RefSeq) leucine-rich repeat protein 1-like
KO
K10348
LRR-repeat protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121330150
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121330150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
LRR_6
LRR_9
STAT2_C
Motif
Other DBs
NCBI-GeneID:
121330150
NCBI-ProteinID:
XP_041132393
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All DBs
Position
17:complement(36557449..36568467)
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AA seq
420 aa
AA seq
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MKLQCEVEVINRMLPTFGMRNRGKAARAVLSIGRHLDNTTKIQNIFLMICTLKHKAGCKY
KLKENIEQFFTRFVEEGKATIRLKEPAVDVCLSKADANNLKNFLSAARLAHRGSEVDALA
LTTLAPARTRDVEKPKSKMSITSKKDYPLTSCFPYSLEQLQVSYCRLSRVDMRMLTLRKL
RKLDLSNNHIKKLPATIGDLCCLAELVLHNNHLETFSTALCQSTLQHSLQYLDLGQNKLR
ALPIQFCQLRELVHLKLDDNEMLRLPVKIGQLSKLRFLSAARNQLPYLPTDFRRLSLENL
DLFGNPFKQPNPLDHTIQLKFPLTLLEMASRAAVNYRIPYSPQLIPAHLCQDLEVSKTCD
CGNACLNFYIQTTVSMNLHHVSHTVVLVDNMGGTEAPVLCYFCSLTCYSEFLDKCLQRSR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcagtgtgaggtggaagttatcaatcggatgctgccgacctttggaatgaga
aatcgaggcaaggcagcgagagcagtgctgtccatcgggagacatctggacaacacgacc
aagatacagaacatatttctcatgatctgcaccttaaagcacaaagcgggctgcaagtac
aagctgaaggagaacatagaacagtttttcaccagattcgtggaagagggaaaggccaca
ataagactgaaggaaccagcagtagacgtctgtctcagtaaggcggatgccaacaacttg
aagaacttcctctccgctgccaggctggctcacagagggagtgaagtcgacgcgttagcc
ttgactactctggctcccgcccggacccgcgatgtggagaaacccaagagcaagatgagc
atcacctccaagaaggactatccgctcacgtcctgcttcccctactccctggagcagctg
caggtgtcctactgcaggctgtctcgggtggacatgcgcatgctgaccctgaggaaactg
aggaagctggacctgagcaacaaccacatcaagaagctgccagccaccatcggggacctg
tgctgcctcgccgagctcgttctgcacaacaaccacctggagaccttcagcaccgccctg
tgccagtccactctgcagcactccctgcagtacctggacctcggccagaacaaactccga
gcccttcccattcagttctgccaactccgggaactcgtgcatctgaagctggacgacaat
gagatgctccgtctcccggtcaagatcgggcagctcagtaaactgcgcttcctctccgca
gcccgcaaccagctgccctacctgcccaccgacttccgcaggctgtcgctggagaacctg
gacctttttgggaaccctttcaagcaacccaatcccctggaccacactattcagttaaaa
ttccccttgactttgctggagatggcttcacgggcagcagtcaactacagaataccatac
agccctcagctcattcctgcgcacttgtgccaagacctggaagtttccaaaacctgcgat
tgtggaaacgcttgtctgaacttctacatccagaccaccgtcagcatgaacctgcaccac
gtgtcccacaccgtcgtcctggtggacaacatgggaggcacagaggcccccgtcctctgc
tatttctgctccctgacttgctactctgaattccttgacaaatgcttgcagcgcagcagg
tga
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