KEGG   Polyodon spathula (Mississippi paddlefish): 121330172
Entry
121330172         CDS       T07273                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015  mRNA surveillance pathway
pspa04261  Adrenergic signaling in cardiomyocytes
pspa04382  Cornified envelope formation
pspa04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121330172
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121330172
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    121330172
  09158 Development and regeneration
   04382 Cornified envelope formation
    121330172
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pspa01009]
    121330172
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121330172
   03036 Chromosome and associated proteins [BR:pspa03036]
    121330172
Protein phosphatases and associated proteins [BR:pspa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     121330172
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     121330172
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     121330172
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Y_phosphatase2
Other DBs
NCBI-GeneID: 121330172
NCBI-ProteinID: XP_041132438
LinkDB
Position
2:complement(11889823..11990344)
AA seq 452 aa
MSGFGAYKEEAQWCLAQINGTTELEVSEADIISTVEFNQTGELLATGDKGGRVVIFQREP
ESKNEPHCQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTI
KLWKVSERDKRPEGYNLKDEEGRLKDLSTVTSLQVPVLMPVDLMVEVSPRRIFANAHTYH
VNSISVNSDCETYMSADDLRINLWHLGITDRSFNIVDIKPANMEELTEVITAAEFHPDHC
NLFVYSSSKGTLRLCDMRASALCDQHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY
LLTRDYLTVNVWDMNMENKPIETYQVHDYLQSKLCSLYENDCIFDKFECAWNGTDSVIMT
GAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCTGGKRRKDDINVDSLDFSKKI
LHTAWHPAENIIAIAATNNLYIFQDKVNSETH
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtccggatttggggcttacaaggaagaagcgcaatggtgtttggctcaaataaacgga
actacagaattggaagtctctgaagctgatataatttccacagttgagttcaaccagaca
ggggaactgctggcaactggggacaaaggggggcgtgttgtcatattccagagggaacct
gagagtaaaaatgagcctcattgccagggagagtacaatgtttatagcacttttcagagc
catgagcctgagttcgattacctgaagagtctggaaatcgaggagaagattaacaaaatc
aggtggctgccacaacagaatgctgctcacttccttttatcaaccaatgataaaactatt
aaattatggaaagttagtgaaagagataagaggccagagggatacaacctgaaagatgaa
gaagggcggcttaaagatctttcaacagtgacatccctgcaggtgccagtcctgatgcca
gtggacctgatggtggaggtgagccctcgaagaatcttcgctaacgctcacacctaccat
gtcaactccatctccgtcaacagcgattgtgagacctacatgtctgctgatgacctcagg
attaacctctggcacttggggatcaccgacaggagcttcaatattgtggacatcaagcct
gccaacatggaggagctgacagaggtgatcacagctgctgagtttcaccccgaccactgt
aacctctttgtttacagcagcagtaaagggacactccggctctgtgatatgagggcctcc
gcgctgtgtgaccagcactccaaactgtttgaagagcctgaagatcctagtaatcgctcc
ttcttctctgaaatcatctcctcgatctccgacgtcaagtttagccacagtggacgctac
ctgttaacaagagattacctcacagtcaacgtctgggatatgaacatggagaacaagccc
attgaaacgtatcaggttcacgattacctccagagcaagctttgttccctgtatgagaat
gactgcatctttgacaagtttgaatgtgcttggaatggtacagatagtgtaattatgacg
ggtgcttacaacaacttcttcagaatgtttgaccgcaacacgaagcgggatgtgaccctg
gaggcctcccgagagagcagcaagcccagagctgtgctgaagccccggcgcgtctgcact
ggaggaaagcgcaggaaggacgatattaacgtggacagcttagacttttccaagaagatc
ttgcatacagcgtggcacccggcagagaacataattgccattgcagcgacaaacaatctg
tacatatttcaggataaagtcaactcggagacgcactag

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