Polyodon spathula (Mississippi paddlefish): 121330172
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Entry
121330172 CDS
T07273
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015
mRNA surveillance pathway
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121330172
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121330172
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121330172
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121330172
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121330172
03036 Chromosome and associated proteins [BR:
pspa03036
]
121330172
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121330172
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121330172
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121330172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
121330172
NCBI-ProteinID:
XP_041132438
LinkDB
All DBs
Position
2:complement(11889823..11990344)
Genome browser
AA seq
452 aa
AA seq
DB search
MSGFGAYKEEAQWCLAQINGTTELEVSEADIISTVEFNQTGELLATGDKGGRVVIFQREP
ESKNEPHCQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTI
KLWKVSERDKRPEGYNLKDEEGRLKDLSTVTSLQVPVLMPVDLMVEVSPRRIFANAHTYH
VNSISVNSDCETYMSADDLRINLWHLGITDRSFNIVDIKPANMEELTEVITAAEFHPDHC
NLFVYSSSKGTLRLCDMRASALCDQHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY
LLTRDYLTVNVWDMNMENKPIETYQVHDYLQSKLCSLYENDCIFDKFECAWNGTDSVIMT
GAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCTGGKRRKDDINVDSLDFSKKI
LHTAWHPAENIIAIAATNNLYIFQDKVNSETH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatttggggcttacaaggaagaagcgcaatggtgtttggctcaaataaacgga
actacagaattggaagtctctgaagctgatataatttccacagttgagttcaaccagaca
ggggaactgctggcaactggggacaaaggggggcgtgttgtcatattccagagggaacct
gagagtaaaaatgagcctcattgccagggagagtacaatgtttatagcacttttcagagc
catgagcctgagttcgattacctgaagagtctggaaatcgaggagaagattaacaaaatc
aggtggctgccacaacagaatgctgctcacttccttttatcaaccaatgataaaactatt
aaattatggaaagttagtgaaagagataagaggccagagggatacaacctgaaagatgaa
gaagggcggcttaaagatctttcaacagtgacatccctgcaggtgccagtcctgatgcca
gtggacctgatggtggaggtgagccctcgaagaatcttcgctaacgctcacacctaccat
gtcaactccatctccgtcaacagcgattgtgagacctacatgtctgctgatgacctcagg
attaacctctggcacttggggatcaccgacaggagcttcaatattgtggacatcaagcct
gccaacatggaggagctgacagaggtgatcacagctgctgagtttcaccccgaccactgt
aacctctttgtttacagcagcagtaaagggacactccggctctgtgatatgagggcctcc
gcgctgtgtgaccagcactccaaactgtttgaagagcctgaagatcctagtaatcgctcc
ttcttctctgaaatcatctcctcgatctccgacgtcaagtttagccacagtggacgctac
ctgttaacaagagattacctcacagtcaacgtctgggatatgaacatggagaacaagccc
attgaaacgtatcaggttcacgattacctccagagcaagctttgttccctgtatgagaat
gactgcatctttgacaagtttgaatgtgcttggaatggtacagatagtgtaattatgacg
ggtgcttacaacaacttcttcagaatgtttgaccgcaacacgaagcgggatgtgaccctg
gaggcctcccgagagagcagcaagcccagagctgtgctgaagccccggcgcgtctgcact
ggaggaaagcgcaggaaggacgatattaacgtggacagcttagacttttccaagaagatc
ttgcatacagcgtggcacccggcagagaacataattgccattgcagcgacaaacaatctg
tacatatttcaggataaagtcaactcggagacgcactag
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