Polyodon spathula (Mississippi paddlefish): 121330195
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Entry
121330195 CDS
T07273
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121330195
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121330195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121330195
Spliceosome [BR:
pspa03041
]
Complex B
Other components
Prp19-related factors
121330195
Complex C
121330195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
121330195
NCBI-ProteinID:
XP_041132468
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All DBs
Position
17:30702498..30707903
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AA seq
536 aa
AA seq
DB search
MSLTSFLPAPTQLSQDQLEAEERSQSQRSRSTALVSSRREPPPYGFRKSWIPRSLEDFGD
GGAFPEIHIAQYPLEMGRKKKTSNALAVQVDAEGKVKYDAIARQGQGKDKVIYSKFTDLL
PKEVVNDDDPGLQRPDEEAVQELTEKTRSALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKGHGDKVAEDGEARERDEIRHD
RRKERQHDRNISRAAPDKRSKLQRDQDRDVSELIALGQPNPRTSNEAQYDQRLFNQSKGM
DSGFAGGEDEVYNVYDQPWKSGRDMAQNIYRPSKNTDKDMYGDNLDTLMQNNRFVPDREF
SGTDRRQRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSGRSKDYDHDKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaacgagctttttacctgccccaactcagctttcccaggaccagctggaagct
gaagaaaggtctcagtcgcaaaggtccaggtcaacagcactggtatcatcacgtagagaa
ccacctccctatggctttagaaagagctggattccaaggtcactggaggactttggagat
ggcggtgcttttccagagattcacattgcccaatacccgctggaaatgggaagaaaaaag
aagacttccaatgctttggcagttcaggtggatgcagaagggaaggtcaaatatgatgcc
attgcccggcaaggacagggaaaagacaaggttatttatagtaagttcacagatttgctt
cctaaggaagttgtgaatgatgatgatccaggccttcagagaccagatgaagaagctgtt
caagagttgacagaaaagacaagatctgctcttgataaacaagtttcacagaagattgca
gcagccatgcctgtgcgtgcagctgataagcaggcccctgctcagtatattaggtacact
ccatcccagcaaggagttgcatttaattctggagccaagcaaagggttattcgaatggtg
gaaatgcagaaggatccgatggaaccaccacgatttaagatcaataagaaaatccctcgt
ggacccccatctccgcctgcaccagtcatgcattcacccagcagaaagatgactgtgaag
gaacagcaagagtggaagattccaccatgcatctcaaactggaaaaacgcaaagggttac
acaattccattagacaaacgtctggcagctgatggacggggactgcagacagttcacatc
aatgagaactttgcaaagcttgcagaggcactctacattgcagacaggaaggctcgtgaa
gctgttgagatgcgtgcccaggtagaaaaaaaaatggctcagaaggagaaagagaagaag
gaggagaagctcagggaactggcccaaatggcaagagaccgaagagctggcatcaaaggt
catggtgacaaagttgcagaggatggagaggctagagagcgtgatgaaatcagacatgac
agaaggaaagagagacagcatgacagaaatatatctagagcagctccagataaaaggtca
aagctacaaagggaccaggacagagatgtcagtgaactcattgcgcttggtcaacccaat
cctcgcacttctaatgaggcacagtatgatcagcgacttttcaatcaaagcaagggtatg
gatagtggttttgctggtggagaggatgaggtttataatgtgtatgaccagccttggaaa
agtggcagggatatggctcagaacatctacagacccagtaagaatactgacaaagatatg
tatggagacaatctggacacactcatgcaaaataacagatttgtgcctgacagggagttc
tctggcactgatcgcagacagcgcagagatggcccggttcagtttgaggaggatccgttc
ggtctggataagttcttggaggaagccaagcagcatggtggctcaaaacggccatcagat
agtggacgttcaaaggattacgaccatgataagaaacgaagaaaagagtga
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