Polyodon spathula (Mississippi paddlefish): 121330199
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Entry
121330199 CDS
T07273
Name
(RefSeq) DDB1- and CUL4-associated factor 4-like
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121330199
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
121330199
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Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
121330199
NCBI-ProteinID:
XP_041132473
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Position
17:20512878..20526537
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AA seq
509 aa
AA seq
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MKRGNWQGRGDWGRADRRRHHNPGRQRERCSHRPAEHRFERGGPGTSQNEPSPETASPSL
PQSSLAPELPGFYFDPEKNRYFRLLPGHNNCNPLTREGIQQREQEGRRVRLLEEDEKLRK
KSSQTGLNSTVLLQKRHLGLVPETSYCRLIHELKVSSMRRHKLEVQSSDSSSPNTDNFKL
IVADSACERVFTVNDVEHGGCKYGIMNFKGCSEGSLSVEMCDNLYFTNRKVNSICWASVT
HPDSHVLLCLVGIADTPGCVSLLPASLFSNSNPDQPGMLCSFKISTAWSCAWCLNPQADK
KFSTGLSRLVIVTDAVTGRRQTYGINSDVLAQQFALRAPVLYNGCRTGEIFSIDLRQRAR
RGHGWKGVRFYQDSAITSVRILQDDNYLVAADMLGKIKLWDLRMAKAVQQYEGHYNEHAY
LPVHLNEQEGLLLAVGQDCYTRLWSLGDGRLLRTIPSPHPAGKDSVPSVVFSSQLGGRRG
LPGLLMAVSQDLYYFSYNSDYQEQRGADA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggcaactggcagggtcgaggagactggggaagagctgatcgaagacgacat
cacaatccaggcaggcaaagggaacgttgcagtcacaggcctgcggaacacaggtttgag
cgcggtggtcctgggacgtcccagaatgaaccctcccctgaaacagcctccccgagcctg
ccccagagctcactggcgccagagctcccggggttttactttgaccctgagaagaatcgc
tatttccgccttctcccaggacacaacaactgcaaccctctgaccagagaggggatccag
cagagggagcaggaggggcgcagggtgcggctactggaggaggacgagaagctcaggaag
aaaagctcccagactggtttgaactccacagtccttttacagaagagacacctgggttta
gtaccagagacctcatactgcaggctgatccatgaactgaaggtgagcagcatgagacgg
cacaagctggaggtgcagagttcagactccagcagccccaacacagacaacttcaaactc
atcgtggcggactctgcctgcgagcgcgtgttcactgtgaatgacgtggagcatgggggc
tgcaagtacggcatcatgaacttcaagggctgcagtgagggctccctctccgtggagatg
tgtgataacctctacttcaccaaccgcaaggtgaattccatctgctgggcatcagtaacg
caccctgactcccacgtactgctttgtctggtgggcatcgcagatacccccggctgtgtc
agccttctgccagcttccttatttagcaactccaacccagatcagccgggaatgctctgc
agctttaagatttcaacagcctggtcctgtgcctggtgccttaacccacaggcagacaag
aagtttagcacaggtttatcgagactggtgattgttacggacgctgtgacgggccgcaga
cagacctatggaatcaacagtgacgtgctggcacagcagtttgcactgcgggctccagtg
ctgtacaatggctgtcgcacgggagagatcttcagcattgacctgcggcagagagccagg
agggggcacggctggaaaggggtgcgcttctaccaggactctgccatcacctcagtgcgc
atcctgcaggatgacaactacctcgtcgcagccgacatgctggggaagataaagctctgg
gatctgcggatggctaaagcagtgcagcagtacgaagggcattacaatgagcatgcctac
ctgcccgtccacctgaacgaacaagaggggctgcttctagcagtcggtcaggactgctac
acgaggctgtggagtctgggagatggtcggctgctgcggactatcccatcgccccacccg
gctggcaaggactctgtgcccagcgtggtgttctcttcacagcttgggggccgcaggggc
ctgccaggactgctcatggcagtgagccaggacctctactacttctcatacaactcggac
taccaggagcagcgaggggcagatgcttag
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