Polyodon spathula (Mississippi paddlefish): 121330199
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Entry
121330199 CDS
T07273
Name
(RefSeq) DDB1- and CUL4-associated factor 4-like
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121330199
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121330199
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
ASA1
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_EML_2
DSE1_N
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
121330199
NCBI-ProteinID:
XP_041132473
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All DBs
Position
17:20512878..20526537
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AA seq
509 aa
AA seq
DB search
MKRGNWQGRGDWGRADRRRHHNPGRQRERCSHRPAEHRFERGGPGTSQNEPSPETASPSL
PQSSLAPELPGFYFDPEKNRYFRLLPGHNNCNPLTREGIQQREQEGRRVRLLEEDEKLRK
KSSQTGLNSTVLLQKRHLGLVPETSYCRLIHELKVSSMRRHKLEVQSSDSSSPNTDNFKL
IVADSACERVFTVNDVEHGGCKYGIMNFKGCSEGSLSVEMCDNLYFTNRKVNSICWASVT
HPDSHVLLCLVGIADTPGCVSLLPASLFSNSNPDQPGMLCSFKISTAWSCAWCLNPQADK
KFSTGLSRLVIVTDAVTGRRQTYGINSDVLAQQFALRAPVLYNGCRTGEIFSIDLRQRAR
RGHGWKGVRFYQDSAITSVRILQDDNYLVAADMLGKIKLWDLRMAKAVQQYEGHYNEHAY
LPVHLNEQEGLLLAVGQDCYTRLWSLGDGRLLRTIPSPHPAGKDSVPSVVFSSQLGGRRG
LPGLLMAVSQDLYYFSYNSDYQEQRGADA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggcaactggcagggtcgaggagactggggaagagctgatcgaagacgacat
cacaatccaggcaggcaaagggaacgttgcagtcacaggcctgcggaacacaggtttgag
cgcggtggtcctgggacgtcccagaatgaaccctcccctgaaacagcctccccgagcctg
ccccagagctcactggcgccagagctcccggggttttactttgaccctgagaagaatcgc
tatttccgccttctcccaggacacaacaactgcaaccctctgaccagagaggggatccag
cagagggagcaggaggggcgcagggtgcggctactggaggaggacgagaagctcaggaag
aaaagctcccagactggtttgaactccacagtccttttacagaagagacacctgggttta
gtaccagagacctcatactgcaggctgatccatgaactgaaggtgagcagcatgagacgg
cacaagctggaggtgcagagttcagactccagcagccccaacacagacaacttcaaactc
atcgtggcggactctgcctgcgagcgcgtgttcactgtgaatgacgtggagcatgggggc
tgcaagtacggcatcatgaacttcaagggctgcagtgagggctccctctccgtggagatg
tgtgataacctctacttcaccaaccgcaaggtgaattccatctgctgggcatcagtaacg
caccctgactcccacgtactgctttgtctggtgggcatcgcagatacccccggctgtgtc
agccttctgccagcttccttatttagcaactccaacccagatcagccgggaatgctctgc
agctttaagatttcaacagcctggtcctgtgcctggtgccttaacccacaggcagacaag
aagtttagcacaggtttatcgagactggtgattgttacggacgctgtgacgggccgcaga
cagacctatggaatcaacagtgacgtgctggcacagcagtttgcactgcgggctccagtg
ctgtacaatggctgtcgcacgggagagatcttcagcattgacctgcggcagagagccagg
agggggcacggctggaaaggggtgcgcttctaccaggactctgccatcacctcagtgcgc
atcctgcaggatgacaactacctcgtcgcagccgacatgctggggaagataaagctctgg
gatctgcggatggctaaagcagtgcagcagtacgaagggcattacaatgagcatgcctac
ctgcccgtccacctgaacgaacaagaggggctgcttctagcagtcggtcaggactgctac
acgaggctgtggagtctgggagatggtcggctgctgcggactatcccatcgccccacccg
gctggcaaggactctgtgcccagcgtggtgttctcttcacagcttgggggccgcaggggc
ctgccaggactgctcatggcagtgagccaggacctctactacttctcatacaactcggac
taccaggagcagcgaggggcagatgcttag
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