Polyodon spathula (Mississippi paddlefish): 121330224
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Entry
121330224 CDS
T07273
Name
(RefSeq) syntaxin-binding protein 6 isoform X1
KO
K08519
syntaxin-binding protein 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121330224
Membrane trafficking [BR:
pspa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
121330224
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec3-PIP2_bind
Synaptobrevin
DUF2761
RNase_J_b_CASP
Motif
Other DBs
NCBI-GeneID:
121330224
NCBI-ProteinID:
XP_041132501
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All DBs
Position
17:complement(27183273..27230738)
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AA seq
209 aa
AA seq
DB search
MSAKSAINKEVFAPHDEKMLGAVQVKRRMKKKIPFLATGGQGDYMTFICLSVTNKKPAQV
SITKVKQFEGSSAFVRRSQWTLDQLRQVNGINPNQDCAEFDLVFDNAFDPWVAGSATEKC
TFFQILHHTCQRFLADRKPEFINCQSKLLGGNSILHSAADSVTSAVQKASQALNERGERL
GRAEEKTGEMMNSAQQFADTAHKLAMKHK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaaatctgccatcaacaaggaggtttttgcaccacatgatgagaaaatgctc
ggagcagtccaggtcaaaaggagaatgaagaaaaagatcccgttccttgccacgggaggg
cagggagactacatgacctttatatgcctgtcagtgacaaataagaagcctgctcaggtc
tccatcaccaaggtcaaacagtttgaaggctcatcagcgtttgtacgaagatcacagtgg
acgcttgatcagctacggcaagtgaatggaattaacccaaatcaagactgtgcagagttc
gatttagtatttgacaacgcttttgacccgtgggtagcaggctcagccacagagaaatgc
acgttctttcagatcctccaccacacttgtcagcggttccttgcagacaggaagccagag
tttattaactgccagtccaagttacttggaggtaacagcatcttgcattcagctgcagat
agcgtcaccagtgcagtacagaaggctagtcaggccttgaatgagcgtggggaacgatta
ggccgcgcagaagagaaaacgggtgaaatgatgaacagtgcccagcagtttgctgacact
gcacacaagcttgccatgaagcacaaatga
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