Polyodon spathula (Mississippi paddlefish): 121330282
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Entry
121330282 CDS
T07273
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121330282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121330282
Spliceosome [BR:
pspa03041
]
Complex A
U1 snRNP components
U1 related factors
121330282
Complex B
121330282
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
121330282
NCBI-ProteinID:
XP_041132606
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All DBs
Position
17:20608603..20648781
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AA seq
830 aa
AA seq
DB search
MEPETASLLFRLRSGQIQAGAVQKMSFPPHMNRPQIGIPPLPPGIPPPQFAGFPQTVPPG
TPMIPVHMGIMTSAPTVLVPTMPMVGKPMGPRKDFPGMRNKENDDSGGPTTTVFVGNISE
KASDMLIRQLLAKCGLVLSWKRVQGASGKLQGKNRTAFGFCEYKEPESTLRSLRLLHELQ
IGDKKLLVKVDAKTKAQLDEWKAKKRSANGSTKPDSSVDEVEEELDDETKRRDQIVKGAI
EGLIREYSSELNAPSQEADTHHRKKKKEKKEDEDINAIDMEEDKRDLISREISKFRDTHK
KLEEEKGKKEKERQEIEKERREREKERERERERRDREREREREREKEKEERERERDRERT
KDKEREREREREKERSRDRSKDRSRSREKSRDKDKKRDREEDEEEAYERRKLERKLRDKE
TAYQERLKNWEIRERKKAREYAKEAEREEERRRETAKEAKRLKEFLEDYDDDRDDPKYYR
GSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQ
PPVKQEPESEEEVEEEKPPQKEERREVELEPESEDDVEEGEELEEEEEEQEDLQEPKPCL
KPTLRPITSAPSVSSGSGGATPNTPGDESPCGIIIPHENSPETHPQEELRPKIGLSLKLG
PSNSPSQPSVGKRKKLVVDSVFNKFDNEESDEVPRKRKLVPLDYEEDEKGGGKGNVNTEE
KRKHIKSLIEKIPTAKPELFLYPLDWSIVDTTLMERRIRPWINKKIIEYIGEEEATLVDF
VCSKVMAHGTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgagacagcctccctacttttcaggctgaggtctggacagatacaggctgga
gctgtacagaaaatgtcatttccccctcacatgaatcgcccacaaattgggattccccct
cttccgccggggatcccccctccccagtttgcaggctttcctcagactgtacctccaggg
acacctatgattccagttcatatgggcattatgacatctgctcctactgtcctggtcccc
actatgcccatggtagggaagccaatgggacctcgcaaagacttccctggcatgagaaac
aaggagaacgatgacagcggtggtccaaccacgacagtctttgtgggaaacatctcagaa
aaagcttccgacatgcttattcggcaactgttagcaaaatgtggcttggtactaagctgg
aaaagagttcaaggagcttctggaaaactccaaggtaaaaacagaacagcgtttggtttc
tgcgagtacaaggagcctgaatccacactccgctcactacggttgttgcacgagttgcag
attggggacaagaagctgctggtgaaagtggatgccaagaccaaagcacagctggatgag
tggaaagccaagaaaaggagcgcaaatgggagcacgaagcctgactcgagtgtggatgag
gtggaggaggagctggacgacgagacaaagcggcgcgaccagattgtgaagggcgccatc
gagggactgatccgagagtactccagtgagctcaacgctccctcccaggaggcagacaca
caccacaggaaaaagaaaaaggaaaagaaagaagatgaagatataaatgcaatagacatg
gaagaagacaaaagagacctgatttctcgagagatcagtaaattcagagacacacacaag
aaactggaagaagagaaagggaagaaagaaaaggagaggcaggagatcgagaaggagcga
cgggagagagagaaggaacgggagcgggagagggagaggcgtgaccgggagagagagagg
gagcgagagagagagaaggaaaaagaggagagggagagggagagagaccgggagcggacc
aaggacaaagagagagagcgagaaagagagcgtgagaaagaacgaagccgggaccgcagc
aaggatcgcagccgatcgcgggagaagagtcgcgataaagacaagaagcgtgaccgtgag
gaagatgaggaggaggcttatgagcgcaggaaacttgaaaggaaactgcgtgacaaggaa
actgcataccaggagcggcttaaaaactgggaaattcgggagaggaagaaggctcgggaa
tacgcaaaagaagcagaacgggaagaagagagaaggcgagaaacggcaaaagaagccaaa
agactgaaggagtttttagaagactatgatgatgaccgggatgatcctaaatattacagg
ggcagcgctctccagaagcgcctgcgagacagagagaaggagatggaggcagacgagcga
gaccggaagcgtgaaaaggaagagctggaggaaatcagacagaggctgctggcagagggg
cacccagaccctgacgcagagctgcagaggatggagcaggaggcagagcggcgccggcag
cccccagtgaagcaggagccagagtcggaagaggaggtagaggaggagaagcctcctcag
aaagaggagaggagggaggtggagctggagccagagtcagaggatgatgtggaagaaggg
gaggagctggaggaggaagaggaggagcaggaagacctccaggagccaaagccctgcctc
aaacccacgttgcggcccatcacctctgcaccctccgtctcctcgggcagtggcggtgcc
accccgaacacgcctggcgatgagtccccctgcggcatcatcatcccccacgagaactcc
cctgagacacacccacaagaggagctacggcccaagatagggctcagcctcaaacttggc
ccatcaaacagcccgagccagcccagcgttgggaagcggaagaagctggtggtggacagc
gtgttcaacaagtttgataacgaggaaagcgatgaggtgcctcgcaagaggaagctggtg
ccactggactacgaggaggacgagaaagggggcggcaagggcaacgtaaacacagaggag
aagcgcaagcatataaagagcctgatagagaagatccccaccgccaagcccgaacttttc
ttataccctctcgactggtccattgtagacacgacactaatggagcgtcgaatcagaccc
tggatcaataagaagatcattgaatacattggagaggaagaggcaacactagtggacttt
gtatgttcgaaggttatggctcacggcacaccacaaggcattctagatgatgttgctatg
gtattagacgaggaagcggaagtcttcatagtgaaaatgtggaggttattgatatacgaa
acagaagcaaagaagattggactggtgaaatga
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