Polyodon spathula (Mississippi paddlefish): 121330332
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Entry
121330332 CDS
T07273
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121330332
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
121330332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF_3
EGF
hEGF
EGF_TEN
Plasmod_Pvs28
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
121330332
NCBI-ProteinID:
XP_041132714
LinkDB
All DBs
Position
17:32648926..32742863
Genome browser
AA seq
2061 aa
AA seq
DB search
MFFLRMDRLRILILVVLVVMLIGLCDSQRDSGRRLESTGTRDTWSQARARSQGNNYSARG
LYRTNGPVTAHVFNPSHSRTNGSHSGRANHPVAAQQNRNLLSKQENKSAVPVKSVVPTAP
PVKDALPQKNGATIAREAIPASLKQRVVAHSSRLRTRQIARQNSANNGDSKQKTAAPSRP
VGPNVCGGRCCTGWAIAPGTNRCIKPDCNPPCQNRGSCSRPQTCVCRSGFQGSRCEERAP
EQVYVLDGSSRVYQPIRPATSLSDRRKTGNTQKRNDTRSQTESAAQASRQRPVSTGQGPS
TTHDRRGQAGSSPQHTGASRTVKRYPSSTGQITSNALPNGNHNQPASGLGTGNLNNAVEP
RGANLTANIDRIKIVFTPMICKRSCNNGQCYNSCEKGDTTTVYSENNQSHISKAGFRIYF
CQIPCMNGGRCIGRDQCWCPSNSTGKFCHLPAPPPEKQHAGKGSSQTASNSSHSMYTLPL
SNQLASIYPSLVNVHIQHPPEAGVEVHQVAHVKPGQVPPRTQENSVEEQQPVRSVQQRSQ
PDNGNGHSKDHSYTNGNSIGNENGHSRPQNRLNGYIGRCFQETIDGQCGKPLPGLTKQDD
CCGSIGASWGLNRCTQCPSKPAYPVIANGLVECPKGYKRMNQTHCQDINECLMPGICKNA
ECLNSRGSYRCTCKPGYMLDTSRSHCISDKAVSMEREMCFRSLSGGSCSLPLTQHITRQI
CCCSRVGKAWGKDCERCPLPDTDHFKEICPAGHGYTYSRSDIQILMRQAKEEELTMGSDT
RQHHHRTHDNGHETPRVPKKEQGGIGQAKIPPVVTEATLKYPVVKTTPDSPVHLDPEPAS
RDTAPINVATQVTEIDRCSATPTVCGPGACISVQGGYTCYCNPGYELNTLQTRCVDVNEC
EKDPCEGKGRCVNNAGSFSCYCHPGYSLVITQNKKTCQDVDECRNPNACPSGRCVNTPGS
FQCVSCGTGYKAVNGRCIDEDECHVTGVCANGRCINLEGSYRCSCSQGYEASLDSKSCKD
INECATHNVCPNGLCINTEGSYTCSDCRSGYRISSDGQRCEDINECGSTNVCPNGVCTNT
EGSFTCSKCRNGYRLSEDKQRCEDINECASPSVCPSGLCANLEGSYSCTACPSGYRVSAD
RQNCEDINECLSPNACPSGICINTEGSFSCTNCRAGYRIAADGRRCEDVDECALPDVCPN
GVCRNNEGSYSCTICGTGYRIAADRSSCEDIDECALPDVCPNGLCRNNEGSFSCTNCRPG
FKVSANGYSCEDIDECALPEVCHNGHCVNNEGSYSCTTCGTGYKISADGFSCEDVNECSS
PEICPSRVCANTVGSFSCMACDSGYTVSDDRSKCEDINECEDISRSCLGGECTNTPGSFI
CACHQGFELIGGTVCIDVNECLTLDICGSNGECMNSEGSYFCVCSAGYTTTAHEIGCQDV
DECREGSVCSRGQCLNSDGSYQCLCEAGFEYSQETRDCEDKDECKEYGSSVCGSWHCENT
LGSYHCFKGCQPGFSTGPDGECDIDECVNETICGSHGFCENTDGSYTCLCDRGFENPPET
PGCVDINECEVITAVCGTAFCENVEGTFLCICSGDDEEFDPETSQCRSRALMGYGSVVDT
PVGAASSGERKECYYNLEDANFCENVLSRNTTKQECCCTVGSGWGDDCEIHPCPITGGDE
YNELCPQGNGFLSMEGTSFGFGQLIYKDADECVMFGSEICKNGLCANMEPGYSCYCRVGF
YYDTIRLECVDHNECQEEDTCVDGECVNTPGSFNCFCSPPLVLDVSRRRCINANFTSDDL
DSEDDIHLDICWEEVSSEYMCSRPLTSRRTTYTECCCLYGVAWSNDCAFCPMRSSADYAA
LCNLPRTDGLGADGLRDRPGYEYGPDGPLYGPGYVDLGNSPYYNNPGPEYGPQDLVPLTP
FRNPSDEYGFRGSPPLRTSQPQEYQPQFVNPYADRFDGFEGLQAEECGILNGCENGRCVR
VREGYTCDCFDGFELDLNKMLCIDINECKDISEQNSLCKNGRCVNTEGSYKCVCLPGFLA
SPQPDHCIPEEPKAHSTEAEQ
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgttctttttaagaatggatcgattgaggattttaattctagtggtgttggtcgtaatg
ctgattggactctgtgactctcaaagggattctggaagaagactcgagagcacaggtaca
cgagatacctggagccaggcgcgagccaggagtcagggcaataattactcagctagaggt
ctgtatcgcacgaatggtcctgttacagcccatgtatttaacccttcacattctcgtacc
aacggttcccattcgggacgggcaaatcacccagtagcagcccagcagaatagaaatctg
ctgtcaaagcaagaaaataaatctgcagtcccagtgaaaagcgtcgtccctacggcaccg
ccagtaaaggatgctttaccccagaagaatggcgctaccatagcccgggaggcaatccca
gcatcactgaaacagcgagtggtggctcattcctccaggctcagaaccaggcagattgcc
aggcagaactctgctaacaatggagactccaaacagaagactgcagcgcctagccgtccc
gtgggacccaatgtgtgtggaggacgttgctgcacgggatgggccatagctcccggcacg
aatcgatgcataaaacctgattgcaacccaccttgccagaaccggggctcctgtagccga
ccccagacctgtgtttgtcgctctgggttccagggctccaggtgtgaagagagggccccc
gagcaggtatatgtcctagatggctcatcaagggtctatcagcccatccgtcccgccaca
tccttatcagacaggagaaaaacaggaaatacccagaaaaggaacgacacaaggagtcaa
actgagagtgctgcccaggcttctagacaacgacctgtgtccacaggccaagggccttct
acgacacatgacagaagagggcaggctgggtcctctccacaacacactggggcttcccgc
acagtcaagcgttacccatcatccactggacagatcacctccaacgctctgcccaatggc
aaccacaatcagccagccagtggacttggaactgggaaccttaataatgccgtggaacca
agaggagcaaacctgacggccaacattgaccgtataaagattgtcttcaccccgatgatc
tgcaagaggagctgtaacaatggtcagtgctacaacagctgtgagaaaggggacactacg
accgtttacagcgaaaacaaccagagccacatctcaaaagcaggatttcgcatctatttc
tgccagattccctgcatgaacggggggcgctgcatcggacgagaccagtgctggtgccca
tcgaactccacaggaaaattctgtcaccttccggcgccacctccagagaaacaacatgca
ggcaaggggagcagtcagactgcaagcaattcatcacattccatgtataccctgccgctg
tctaaccagctagcctccatttacccttccctggtaaatgttcacattcaacaccctcct
gaagcgggggtggaggtccaccaggtggcccacgtgaagccgggtcaggttcctcccaga
acgcaggaaaacagcgttgaggaacagcagcctgtgcgctcagtgcagcagaggtcccag
ccagataatgggaacggacactccaaggatcacagctacaccaatgggaacagcattggg
aatgagaacgggcactccagaccgcagaacagactcaacggatacataggaagatgtttc
caggaaaccattgatgggcagtgtggtaaaccccttcctggactgaccaagcaagacgat
tgctgtggcagtattggagcatcatggggactgaacaggtgtacgcaatgcccttcaaaa
ccagcttatccagtaattgcaaatggcttggttgaatgtccaaagggctacaagaggatg
aaccaaactcactgtcaagatatcaacgaatgtctcatgcctggaatctgcaagaacgcg
gagtgtctgaactcccgaggcagctacagatgtacctgcaaacctggatacatgctcgac
acatcccgtagccactgcatctcggacaaggctgtgtccatggagcgggaaatgtgcttc
cgttcgctctctggaggctcctgctccctgcctctcacccagcacatcaccagacagatc
tgctgctgcagccgagttggcaaagcgtggggcaaggactgcgagaggtgcccgctgcct
gacacagatcattttaaagagatctgccccgctggtcatggctacacatactccaggtca
gatattcagatcttgatgaggcaggcaaaggaggaggagttaaccatgggctccgatact
cgccagcaccaccaccgtacccatgacaacggccatgagacacccagggtacccaaaaag
gagcaaggagggattgggcaagccaaaatacctcctgttgtaactgaagccactctgaaa
tacccagtggtgaagacaaccccagattctcccgtccacctggaccctgagcctgcctcc
cgggacacggcccccatcaacgtagcgacccaggtcacagaaatcgaccggtgttcagct
acacccactgtctgtggtccaggtgcctgtatcagtgtgcagggtggatacacctgctac
tgtaaccctggctatgagctcaatacactgcagacccgctgcgtggatgtcaatgagtgt
gagaaggacccctgcgaaggaaagggacgctgtgtgaacaacgctgggtcctttagctgc
tattgtcaccctggatacagcctggtcattacacagaacaagaagacatgccaagacgtc
gacgaatgccgaaaccccaacgcctgtcccagtggaagatgtgttaacaccccaggctcc
ttccagtgtgtgagctgtgggactgggtacaaggctgtgaacgggagatgtatagatgaa
gatgaatgccatgtcactggagtctgtgcaaatggaaggtgtatcaatctggagggctcc
tatagatgtagctgcagccagggatatgaagcatctttggacagcaaaagctgcaaagat
atcaatgagtgtgccacacacaatgtatgccctaatggactgtgcatcaacactgaaggt
tcctacacatgttctgactgtagatctggttacaggatatcttcagatgggcagagatgt
gaagatataaatgagtgtggctcaacgaatgtgtgtccaaatggagtctgcacgaatact
gagggctctttcacctgctccaagtgcaggaatgggtacagactttctgaggacaagcag
agatgtgaagacatcaatgagtgtgcgtcgcccagcgtgtgccccagtggattgtgtgcc
aacttggaaggttcctactcctgcactgcttgtccttccgggtacagggtatctgcagac
aggcagaactgcgaagatatcaatgaatgcttatcccctaatgcgtgcccctctggaatc
tgcatcaacactgaaggttctttctcctgcactaactgcagagctgggtacaggatagct
gcagatgggcgtagatgtgaagatgttgatgagtgtgctttgcctgacgtgtgccctaat
ggggtctgtcggaataatgaggggtcgtactcctgtacgatctgtgggactgggtacagg
atagctgcagacaggagtagctgtgaagacattgatgagtgtgcattgccagatgtttgt
cccaatgggctttgcaggaataatgaaggatccttttcttgcacaaactgtagacctggt
ttcaaggtatctgcaaatggatattcatgtgaagatatcgatgagtgtgctttgccagaa
gtgtgtcacaatgggcactgtgtgaacaatgaaggttcatactcctgcacaacctgtggg
actgggtacaagatctctgctgatggcttcagctgtgaagatgttaacgagtgctcatct
ccagagatctgtcccagcagagtctgcgcaaacactgtggggtccttctcctgcatggcc
tgtgatagtggctacacagtgtctgatgacagaagcaagtgtgaagatataaatgaatgc
gaggatatcagccgcagctgtttgggtggagaatgcacaaacactcccggatccttcatc
tgcgcttgtcaccaaggcttcgagctcatcggaggaaccgtttgcattgatgtaaacgag
tgcctgactttggatatctgtggctccaatggcgagtgtatgaatagcgagggctcctat
ttctgtgtctgctctgcaggatacaccaccacagctcatgaaattggctgtcaagatgtt
gatgagtgcagagaggggagtgtgtgttccagagggcagtgtttgaactctgatgggtcc
tatcagtgcctctgtgaagccggatttgaatattcgcaggaaaccagagactgcgaagat
aaggacgagtgtaaagagtatggaagcagtgtctgtggcagctggcactgtgagaacaca
ctgggttcataccactgcttcaagggctgccagcctgggttcagcactggaccagatgga
gagtgtgacattgatgagtgtgttaatgagaccatctgtggcagccacggtttctgtgag
aacacggacggctcgtacacatgcctctgcgaccggggctttgaaaacccgcctgagact
ccaggatgtgttgacatcaatgagtgtgaggtgatcacagcggtgtgcgggacggctttc
tgtgagaacgtggagggcaccttcctgtgtatctgctccggcgacgatgaggaattcgac
ccagagaccagccaatgccgaagcagggcgctgatgggatatgggagcgtagtggacaca
ccagtgggggctgcctctagtggagagaggaaggagtgttattacaacctggaagatgcc
aatttctgcgagaacgtgctgtcccggaacaccaccaagcaggagtgctgctgtactgtg
gggtccggctggggggacgactgtgagatccacccctgcccaatcactgggggagatgaa
tacaatgagctctgtccacaagggaatggattcttatcaatggaaggcacgtcctttggc
tttgggcaactgatatataaagatgcagatgaatgtgtaatgtttgggtccgaaatctgt
aaaaacggtctctgtgcaaatatggagcctggctactcctgttactgccgagtgggattc
tattatgataccatccgcctggaatgtgttgatcacaatgagtgtcaggaggaggatacc
tgtgtggatggagagtgtgtgaacacgcccgggtcctttaactgtttctgcagccctcca
cttgtcctggatgtgagccgcagacgctgcatcaacgcaaacttcacatcagatgatctg
gatagtgaggacgatatccacttggatatctgctgggaggaggtgtctagcgagtacatg
tgctcgagacctcttacaagcagacggaccacctacacagagtgctgctgtctctatggt
gtagcctggagcaatgactgtgccttttgcccaatgaggagctcagcggattatgcagcg
ctgtgtaaccttccaaggacagatggcctgggggcagatggtctcagagacagaccaggc
tatgaatatggaccagatggacctttatatgggccaggctatgtggatcttggaaatagc
ccttattacaacaacccgggaccggagtatggaccccaggaccttgtccctttgacccct
tttaggaacccgagcgatgagtatgggttcagagggtccccgcctcttcgaacaagtcaa
ccgcaagagtaccagcctcagtttgtaaacccttatgctgacaggttcgatgggtttgaa
ggattgcaggctgaggaatgtgggattttgaatggctgtgagaatggccgctgcgtgaga
gtgcgggagggttacacctgcgactgctttgatggctttgagcttgatttaaacaaaatg
ctctgcattgatataaatgaatgtaaagacattagcgaacaaaactccctgtgcaaaaat
ggcaggtgcgtgaacacggagggatcgtataaatgtgtgtgcctgccaggattcctggca
tcgccgcagccggatcactgcattcccgaagagcctaaagcccacagcaccgaggcggag
cagtga
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