Polyodon spathula (Mississippi paddlefish): 121330334
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Entry
121330334 CDS
T07273
Name
(RefSeq) 26S proteasome regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121330334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pspa03051
]
121330334
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121330334
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
DUF815
nSTAND3
AAA_5
AAA_16
RuvB_N
AAA_28
AAA_25
ATPase
AAA_14
AAA_3
RNA_helicase
NPHP3_N
TIP49
AAA_33
NB-ARC
IstB_IS21
NACHT
Prot_ATP_ID_OB_N
Mg_chelatase
AAA_7
AAA_24
Parvo_NS1
SLFN-g3_helicase
ABC_tran
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
121330334
NCBI-ProteinID:
XP_041132719
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Position
17:complement(29924310..29930428)
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKRKKKSKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVNLDDLILAKDDLSGADIKAICTEGGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagccagagtggagggcatggacctggtggtggcaagaaggatgataaggac
aagaagaagaaatatgaaccaccaattccaaccagagttggcaaaaggaagaagaaatca
aaaggaccagatgcagctagcaagttaccattggtgacccctcacactcagtgcagactg
aagcttcttaaattggagcgaattaaagattacttgctaatggaagaagaatttatccga
aatcaagaacagatgaaacccctagaagagaagcaagaggaagagagatcaaaggtagat
gatctgcgaggaaccccaatgtctgtgggtactctggaggagatcatagatgacaaccat
gccatagtctctacatctgtgggttcagagcactatgtcagtattctgtcattcgtagac
aaggatctgctggagcctggttgctctgtcctccttaaccacaaggttcatgctgtcata
ggagttttgatggacgacacagatcctttggtcactgtcatgaaggttgagaaggcccct
caggagacatatgcagacattggagggctggataaccagattcaagaaatcaaagaatct
gttgaacttccacttacccatccagaatattatgaagagatgggtatcaagcctcctaaa
ggagttattctatatggggctcctggtacaggcaaaactctcttggccaaagctgttgcg
aatcagacatcagctacttttcttcgagtggttgggtccgagttaattcagaagtacctg
ggtgatggtccaaaacttgtgcgcgagctgttcagagtggcagaggagcacgctccttct
attgtatttattgatgaaatcgatgccattggtacaaagagatacgactcaaattctggg
ggtgagcgagagattcagcgtacaatgttggagctactcaaccagctggatggttttgat
tctcgtggagatgtcaaggtcatcatggcaacaaacaggatagaaactctagacccagcc
cttatcaggccaggaagaattgaccgtaaaattgagttcccattgcctgacgaaaagacc
aagaagcgaatctttcagatccacacaagcagaatgacactggctgacgatgtaaacttg
gatgatttaattttggcaaaagatgatctttctggggcagacataaaggccatttgcaca
gaaggtggattgatggcattacgagaacgtagaatgaaagtgacaaatgaagactttaaa
aagtccaaagaaaatgttctttacaagaaacaggagggcacaccagagggactctatctt
taa
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