Polyodon spathula (Mississippi paddlefish): 121330378
Help
Entry
121330378 CDS
T07273
Name
(RefSeq) homeobox protein six1b-like
KO
K15614
homeobox protein SIX1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121330378
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
121330378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Motif
Other DBs
NCBI-GeneID:
121330378
NCBI-ProteinID:
XP_041132790
LinkDB
All DBs
Position
17:complement(33498023..33500817)
Genome browser
AA seq
284 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKLLESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNSGNNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSVLLLQGNMNH
SVGSSYPLAGLSASQSVHSIQGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgctgccttcattcggctttacccaggagcaagtggcctgtgtgtgtgaggtg
ctccagcaaggggggaacttggaaagactgggacggtttctgtggtcccttcccgcgtgt
gaccatctacacaagaacgaaagcgtcctgaaagctaaggcggtggtagcgtttcaccgt
ggcaatttcagagagttgtacaaattactagagagccaccaattttccccacacaaccac
cccaaactccagcagctgtggctgaaggcgcactacgtcgaggctgaaaaactgagaggg
agacctctgggcgcagtcgggaaatacagggtacgaagaaaattccctttgccccggaca
atttgggacggggaagaaaccagctactgctttaaggaaaaatccaggggcgtactgagg
gaatggtacacccacaacccgtacccgtctccgcgggagaagagagaattagccgaggcc
acgggactcaccacaacgcaagtcagcaactggttcaaaaatagaagacagagggacaga
gccgcagaagctaaagaaagggagaacagtgaaaacaacaactctggcaacaacaaacag
aaccagctatccccactggatgggggcaaatctctaatgtcaagctcagaagacgagttt
tcacccccgcagagccctgatcagaactcagtcttactgttgcagggaaacatgaaccac
tctgtgggctccagttatcccttggccggtctaagcgcttctcagtctgttcatagcatt
caaggacatccgcaccagctccaagactctcttctcggacccctaacttctagccttgtg
gatcttggctcttaa
DBGET
integrated database retrieval system
