Polyodon spathula (Mississippi paddlefish): 121330408
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Entry
121330408 CDS
T07273
Symbol
rab3il1
Name
(RefSeq) guanine nucleotide exchange factor for Rab-3A isoform X1
KO
K16779
Rab-3A-interacting protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121330408 (rab3il1)
03036 Chromosome and associated proteins [BR:
pspa03036
]
121330408 (rab3il1)
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121330408 (rab3il1)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121330408 (rab3il1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
DUF7201
FapA
DUF6315
TcaA_2nd
HAUS-augmin3
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
121330408
NCBI-ProteinID:
XP_041132840
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All DBs
Position
17:4908168..4922327
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AA seq
453 aa
AA seq
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MDSFEGLHSVTLSPSSLPPQTSLGYEILITGETQVYSSPALFCGSRYQPPHASANHQGYP
EISARGKEGVTNNHDSLLDLEAGSWSVSSESAGSERAVPMPLGAGVDPEGPESEENVRAR
YNVARLRSSSVEIREKGSEILKEELQKAQKELKLKDEECERLSRVREQLEQELEELTASL
FEEAHKMVREANTKQAVAEKQLREAQGKIDVLLAEVCALKTLVLTSTPSSPNREMHPQLL
SPSKAVFKKGHARNKSASSAVATATPPPGSATQPISRESKEVDSVLFSEFLSWRMEPSLE
PDSPFLQRVYREDIGPCLSFAKRELSQSVQAAVESNTLSIEPAAVQALPVVKASAIECGG
PNGSRAHVVTKCALSGMSRACKHRIKLGDSGSHYYISPCSRARITAVCNFFTYIRYIQQG
LVRQEDEQMYWEVMRLRKEMSVAKLGFFREDEV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggattcctttgagggtctgcactctgtcacgctctcccccagctccctgcctccccag
accagcctgggttatgagattctcatcacaggggaaacacaggtctactcctccccagct
ctgttttgcgggagtcggtaccagcccccccacgccagcgccaatcaccaggggtaccct
gaaatcagcgcgaggggcaaggaaggggtcaccaacaaccatgacagtctcctggatctg
gaggcggggtcctggagcgtgtccagtgagagtgcggggagcgagcgggctgttccaatg
ccgctgggagccggggtggatccagagggtcccgagagcgaggagaacgtgcgggcgcgg
tacaacgtggcccgactgcgcagctcctccgttgagatccgggagaagggatcggagatc
ctgaaagaggagctgcagaaagcacagaaagagctcaagctgaaggatgaggagtgtgag
cgcctgtcccgggttcgagagcagctggagcaggagctggaggagctgactgccagcctg
ttcgaggaggctcacaagatggttcgggaggcgaacacaaagcaggccgtggcggagaaa
cagctgagagaagcccaggggaagattgacgttctcctggcggaagtctgtgctctcaag
acgctggtcctcacctcaaccccctcctccccgaacagggagatgcacccccagctgctc
agcccttccaaggccgtcttcaagaagggccatgcccgcaacaagagcgccagcagcgcc
gtcgccacggcaacccccccgccgggctccgccacgcagccaatcagcagagagagcaag
gaggtggactctgtcctgttctcagagttcctgtcctggaggatggagccaagcctcgag
ccagacagccccttcctgcagcgagtctacagggaggacatcggaccctgcctgtccttc
gctaagagagagctctcccagtctgttcaggctgcagtagagagtaacactctgagtatt
gaaccagctgcagtccaggccttgccagtggtgaaagcttcagccatcgagtgcggcggc
cccaatgggtcgcgggctcatgtagtgacgaagtgtgctctgagtggaatgtcacgggcc
tgcaagcaccgaatcaaactgggagactctgggagccattactacatctccccatgcagt
cgagcccggatcactgctgtgtgtaacttctttacctatattcgttatatccagcagggg
ctggtccggcaggaagatgagcagatgtactgggaggtgatgagactcaggaaggagatg
tctgtggcaaaactgggcttcttcagagaagacgaggtttag
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