Polyodon spathula (Mississippi paddlefish): 121330446
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Entry
121330446 CDS
T07273
Symbol
toe1
Name
(RefSeq) target of EGR1 protein 1
KO
K13202
target of EGR1 protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121330446 (toe1)
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121330446 (toe1)
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Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
121330446
NCBI-ProteinID:
XP_041132897
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Position
18:complement(29065616..29071710)
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AA seq
521 aa
AA seq
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MSSMIVPVIDVQNDNFKELWPAMVLAIKTSSFIALDTELSGLGSRKDLLAQCIEERYKAI
CNAARTRSILSLGIACFKKLPDKAPHTYLVQVYNLTLLCMQEYVIEPQSVQFLVQHGFDF
NKQYAQGIPYCKGNDKGGDLQSQSMRALFLEVIQARKPLVLHNGLIDLVFLYQCFYAWLP
DRLGTFTADLSEIFPAGIFDTKHAAEFEVRFMASYLEYAYKKCKRENFKSIEAGRPGPHL
SLEFCNYTERLCTYIDFRQCTEGGEERETGEEGPPAICTRFSAYGWCPSGSQCTLSHNTD
LIIEQDEQNKDRKRRRKNKRKFKAPQEVSRAPNEPDRVQHESSPPNKQLCVEDDKMQEDR
GSVKETASADVVQIMKDALLAEEVERKDMSDEQVVEEAQGSNGTEDKCELVNKCETTGDQ
SDVVVPKGEKEGSKGKEQQKKAEGGTHRAGFDAFMTGYIFAYVTTLKAGAETDPSSGACL
PDCLNKVYLSGKSVPLHIVKSSFSKSSKAHTLKMESVWGKI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatgatcgtccccgtaattgatgtccagaatgataactttaaagagctctgg
ccagccatggtgctggcgatcaaaacatcgtctttcatagcgctggatactgaattaagt
ggtcttggatcaagaaaggatttactggcacaatgtattgaagaacggtacaaagccatt
tgcaatgctgcacggacacgctctattttgtccttgggaattgcctgtttcaaaaagctt
cctgataaggctcctcacacttacctggtgcaggtgtacaacctgactctgctttgcatg
caggagtatgtgatcgaaccgcagtcagtgcagttcctggtgcagcatggcttcgacttt
aacaagcagtatgcccagggcatcccatactgtaaaggaaacgacaagggcggtgatctg
cagagccagagcatgcgagcgcttttcctggaggtgattcaagcgcggaagcccctggtc
cttcacaatggactcatagacctggtctttctttaccagtgtttctacgcttggctccca
gatcggctgggcaccttcactgcagacctatctgagatcttccctgctggcatcttcgac
accaaacatgctgcagagtttgaggtgcgcttcatggcctcctatctggaatacgcctac
aagaagtgtaaacgagaaaatttcaaatcaattgaagcgggtagacctggcccccacctc
tctttggagttctgcaactacacagagagactgtgcacctacattgacttccgacagtgc
acagaggggggtgaggagagagagactggtgaggagggaccccctgccatctgtacaagg
ttctctgcatatggctggtgccccagtggatcacagtgcactctgtctcacaacacagac
ctcatcatagagcaagatgagcaaaataaggatcgtaagagaaggagaaagaacaagagg
aaattcaaagctcctcaggaggtgtccagggcccccaatgagcctgatcgcgttcagcat
gaaagcagcccgccgaacaaacagctctgtgtggaggatgataaaatgcaggaagatcgg
ggatctgtgaaggagacagcctctgctgatgtagtacagatcatgaaggatgcactacta
gcggaagaagtggagaggaaggatatgagtgatgagcaagtggttgaggaagcacagggt
tcaaatgggacagaagacaagtgtgagcttgtgaacaagtgtgagacaactggagatcag
agtgatgtggtggtacctaaaggagaaaaagaaggcagcaaggggaaagagcagcagaag
aaggcagagggggggacgcacagagctgggtttgatgctttcatgacgggatacatcttt
gcatacgtcactacattgaaggcaggagcggaaactgacccaagttcaggggcatgtctg
ccagactgcctgaacaaagtgtatctcagtgggaaatctgttcccctgcacattgtaaaa
agcagcttttccaagtcttcaaaagcccacactctcaaaatggagtcagtctggggcaag
atttga
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