Polyodon spathula (Mississippi paddlefish): 121330516
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Entry
121330516 CDS
T07273
Symbol
jmjd8
Name
(RefSeq) jmjC domain-containing protein 8 isoform X1
KO
K25792
jumonji domain-containing protein 8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121330516 (jmjd8)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
121330516 (jmjd8)
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Gene cluster
GFIT
Motif
Pfam:
Cupin_8
JmjC_2
JmjC
Cupin_2
Cupin_1
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
121330516
NCBI-ProteinID:
XP_041133012
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All DBs
Position
18:11091079..11099052
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AA seq
273 aa
AA seq
DB search
MEEYCCVLLTVACFISLPSVQSENYYAKNALTADGGWLSTRNSSPADEGPCTVEVRDQSL
TYSQFIERYAYSRPVIIRGLTDNTKFQFQCSKSSLLQEFGDRMVRLSTANTYSYRKVDVP
FQEFVEHLLRPQSLETLGSDTLYFFGDNNFTEWRSLFQNYFPPPYTLPGTSGAYSFGIAG
PGTGVPFHWHGPGYSEVIYGRKRWFLYPPEKVPNFHPNKTTLSWVVDTYPALNQEDRPIE
CTIHPGEVLFFPDRWWHATLNLDTSVFISTFLG
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatattgttgcgtgcttctcactgttgcctgctttatctcgctgccgtcagta
caatctgagaattattatgcaaagaacgcgctgacagcagatggaggctggctgtccacc
agaaactcaagcccagctgacgagggcccatgcacagtggaggtcagggaccagtctttg
acgtactcccagttcattgaaagatatgcatattccagacctgtcattatccgaggactt
acagacaacacaaagttccagtttcagtgctccaagagcagcctgctacaggagtttggg
gaccggatggttcgtctgagtactgctaacacctactcctacagaaaagttgacgtgccc
ttccaggagtttgttgagcacttgttgaggccgcagtcactcgagacgctgggcagtgac
actctgtacttctttggagacaataacttcactgaatggaggtccctgttccaaaactac
tttcctccgccgtacacgcttccaggaacaagcggggcgtacagcttcggcatagcgggt
cctgggacgggggtaccgtttcactggcacggcccggggtactcggaggttatctatggg
aggaagcgctggttcctgtacccccctgagaaagtccctaatttccaccccaacaagacc
acgctgtcctgggtagtggacacgtaccctgccctgaaccaggaggaccggcccattgag
tgcaccatacacccgggggaggtgctgttcttccctgatcggtggtggcacgctactctc
aatctggacactagcgttttcatctccacattcctagggtga
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