Polyodon spathula (Mississippi paddlefish): 121330543
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Entry
121330543 CDS
T07273
Name
(RefSeq) laminin subunit gamma-2-like
KO
K06246
laminin, gamma 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04382
Cornified envelope formation
pspa04510
Focal adhesion
pspa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121330543
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121330543
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121330543
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
GreA_GreB_N
Motif
Other DBs
NCBI-GeneID:
121330543
NCBI-ProteinID:
XP_041133065
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Position
18:24842492..24857040
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AA seq
1137 aa
AA seq
DB search
MQSALTLWSGIFLFSLPFVHGTFRYDSDCKCNGKASHCTFDPQGYICLNCIDNTDGRNCE
KCKSGFFHQRPEERCQPCRCNTMGSLSAQCDNYGRCSCKPGVMGDKCDRCQSGSALTQAG
CGGRCRSRASGLGAGHPAECLVCFCFGHSSDCTFAEGYSTHSITSTFDNDPDGWRASFKS
GSQVQFRWSSKHRDVFITSMDNNPVYLLAPDSFLGNQVLSYGQNLSFSFMVGRGERRPSP
EDVVLEGAGLRVAAPLADLGTILPCGKMSAYTFRLDEQPGSKWSPVLNALEFHKLLNNLT
AIKIRGTYGEKSYGYLDNVRLESARRGAGAPASWVEKCSCPMGYRGQFCQECAPGYRRDS
PSSGSFSACVPCNCRGGTCDQDTGDCYSGDETPVVQCPTGTYNSPENPRTCLRCPCAPGV
SCVVALGHREVACVGCPAGMTGSRCEMCEDGYYGDPLGERGPPRPCQRCRCNDNIDPNTA
GNCDRLSGECLRCLYNTAGFHCEQCSEGFYRSTSIPNSAERCTPCNCNTLGSLSPQCSKN
GQCQCKEGHEGTKCEQKTVCPACYSQVKYQMERHLLKLRDTEALFKRIDTSRTPFSEMEV
EKAIREAEKNIADLQRDTDQLSGSDKALLSRLAGISNTQSTQSRNLDGVSRTVDGMKSLA
QQYQYQVDTVKGLISSARQTVDKAKVEMRQVELPSTDAGTGTNSLSGLAHEATTLADRHR
TEAEGIARAAKTSSTSANEAYQLMQSVINGENKVANSIQDLNTMYNRDIATVNDLENQAA
RLSSAGEKASRLATETFRDLLGFQMINPSSLQSEMKRLTQEAKLLQANAEGKLSSIQKLN
QEVTADESEATKLLAKGISDQQLGDQLLARANVAKAEALRALNNGQANLERVEDVLTKLQ
GFNGQLNQNKKEAEDAVDKIPFIRGLVREATQTNKQAETVLGNADKDVTKAIQNARDAGD
IAENMGTEAQNSQLKLNGLFNNVLTLDNDLNGLKLATLHVQDRLATAENNANQDAEAVKQ
ASKEATAAYDSAVQTKRAVGDTLSIISNLLNLLDQPGSLDEGRLKQLERSIADSMEQVES
QLKPRMADLELMEARQRQRITALTTDIDNILNDIQNLEEIRDKIPKGCFNTAPIERP
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgcattgacattatggtctggaatcttcttattcagcctgccttttgtacat
ggtacctttagatatgactctgactgtaagtgcaatggtaaggcttcccattgtacattc
gacccccagggatacatctgtttgaactgcattgataacactgatggacgaaactgtgaa
aagtgtaagagcgggttcttccatcagaggcctgaagagcggtgccagccatgccgctgc
aacactatgggatccctgagtgctcagtgtgataattacgggcgttgcagctgcaaacca
ggagtgatgggtgataagtgtgatcgctgtcagtctgggagcgctcttacacaagctggg
tgtggtggcagatgtcggtcacgtgccagtggcttgggagcaggtcacccggcagagtgc
ctggtgtgtttctgctttgggcattcttccgactgtacctttgcagaggggtacagcact
cacagcatcacctccacctttgacaatgatcccgatggatggcgagcttctttcaaaagt
ggttcccaagtgcagttccgctggtcctctaagcaccgtgatgttttcataacatccatg
gacaacaatcctgtctacctgctggcaccagattcgtttttggggaaccaggtgctgagc
tatggacagaacctttccttctcgttcatggtgggtcgaggagagcggaggccatcccca
gaagatgtggtgctggagggagcagggctgagggtggcagctcccctggcagacctagga
acaatcctgccctgcggcaagatgagtgcctacaccttcaggcttgatgaacaaccaggc
agtaaatggagtccggtactcaatgcattagaatttcacaaactgctgaataacttgact
gccattaagattcgaggcacctatggggaaaagagctatggataccttgacaatgtgcgt
ctggagtcagcccgtcgaggtgctggagcccctgcctcctgggttgagaagtgtagttgt
cccatgggctaccggggtcagttctgccaggaatgtgctccagggtaccggagagactct
cctagcagtggatctttcagtgcctgtgttccctgtaattgccggggaggcacctgcgac
caagacactggagactgttactctggagacgagaccccggttgtccagtgcccaactggt
acctacaatagcccagagaaccccagaacctgcctgcgttgcccctgtgccccaggagtc
agctgtgtcgtcgctctaggccaccgagaagtggcatgtgttgggtgccctgcgggaatg
acaggctcccgatgtgagatgtgtgaagatggttactacggcgaccccctgggtgagcgc
ggtcccccccggccttgtcagcgctgcaggtgcaatgacaacatcgaccccaacactgca
ggcaactgcgatcgtttgagcggggagtgcctcaggtgcctctacaacactgccggcttc
cactgcgagcagtgcagtgagggcttctacaggagcacctccatccccaactctgccgag
cgctgcacaccatgtaactgcaacactctgggctcactgtcaccacagtgcagcaagaat
ggccagtgtcaatgtaaagaaggacatgaaggaacaaagtgcgaacaaaaaacagtttgt
ccagcctgctacagccaagtgaaataccagatggagaggcatttgctgaagctgagggat
acagaagctctgtttaaaagaattgataccagccgtacccccttctctgagatggaggtg
gagaaggccatcagagaggctgaaaaaaacattgcagacctacagagagacacagaccaa
ttatcaggttctgacaaagcgctgctcagtcgcttggctggtataagtaacacacagtcc
actcagtcaagaaacctggatggtgtttcccggacagtggatgggatgaagtctcttgct
cagcagtatcagtaccaggttgacactgtcaaggggctgatcagcagtgccagacagact
gtggacaaggcgaaagtggagatgcgacaagtggaacttccctctacggacgctgggaca
ggcacaaacagcctctcaggcttggcacatgaggcaaccacattagcagacagacaccgc
actgaggccgaaggaatcgcgcgagcagctaaaaccagcagcacctctgcaaatgaagcc
tatcagctgatgcaatcagtgatcaatggagagaacaaggtggccaatagcattcaggat
ctgaacacaatgtataacagagatatagccacagtcaacgacctggaaaaccaggctgcc
aggctgagctctgctggtgaaaaggcaagccgtttggcgacagagacctttagggatctc
ttagggtttcagatgattaacccaagttctctgcagagcgagatgaaaaggctcactcag
gaggctaagctcttgcaagccaatgcggagggaaagctctccagtattcagaaattaaac
caagaggtgacggctgatgagtctgaggccacaaaactgctggccaaagggatatctgac
cagcagcttggggatcagctcctagcaagagcaaatgttgccaaggctgaggcgttgagg
gcattgaacaacgggcaggctaacctggaaagggtggaggacgtcctaaccaagctccaa
gggttcaatggacagctaaatcaaaacaagaaggaagctgaagacgcagtggataaaatc
cctttcattagaggccttgttcgagaggccacacagacaaacaagcaggcagagacggta
ctggggaatgctgacaaagatgtgaccaaggcaatacaaaatgcaagagatgcaggggac
atagctgaaaacatgggcacggaagcacaaaactctcaattaaaattgaatggattgttc
aataatgtgttgacgttagacaacgacctaaatggcttgaagctggcaacgttacacgtt
caggatcggttggccacagcagaaaataatgcaaaccaggatgcagaggccgtgaaacag
gcttctaaggaggcaactgcagcttatgacagtgcagtacagactaaaagagctgttgga
gatacactgtccatcattagcaacctgctcaatctacttgaccagccaggcagtttagat
gaaggtagactgaagcagctggaaaggtcgatagcagacagcatggagcaagtggagagt
cagctgaaacccagaatggcagacctggaactaatggaggcaagacagcgacagagaatt
actgccctcaccactgacattgacaacatcttaaacgacattcaaaacctagaagagatt
cgggataaaatccctaagggatgcttcaacactgcacccatagagagaccctaa
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