Polyodon spathula (Mississippi paddlefish): 121330549
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Entry
121330549 CDS
T07273
Symbol
rab33ba
Name
(RefSeq) RAB33B, member RAS oncogene family a
KO
K07920
Ras-related protein Rab-33B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121330549 (rab33ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121330549 (rab33ba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121330549 (rab33ba)
04031 GTP-binding proteins [BR:
pspa04031
]
121330549 (rab33ba)
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
121330549 (rab33ba)
Others
Specific organelles associated proteins
Auto phagosome
121330549 (rab33ba)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121330549 (rab33ba)
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
121330549 (rab33ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
MMR_HSR1
SRPRB
G-alpha
RsgA_GTPase
ATP_bind_1
PduV-EutP
TniB
Septin
AAA_25
CENP-M
AAA_22
Thioredoxin_14
Motif
Other DBs
NCBI-GeneID:
121330549
NCBI-ProteinID:
XP_041133079
LinkDB
All DBs
Position
2:complement(14154904..14167148)
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AA seq
224 aa
AA seq
DB search
MSEMESSLELTNSLTASSLPPPRSRIFKIIVIGDSGVGKTCLTYRFCAGRFPDKTEATIG
VDFREKIIEIDGEKIKVQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDVTNPSSFQNLPS
WIEECRQHSLGSEVPRLLVGNKCDLRESVRVSTDQVQKFADSQSMPLFETSAKNPDDNDH
VEAIFMTLAHKLKSQKPLMLSQPAGGENSVRLKPEQKLPGVCWC
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatggagtcctccctagaattgaccaattctctcaccgcctcttcgctccca
ccgccccgctctcgtatctttaaaatcatcgtgattggagactctggggtcggcaagaca
tgtctgacctaccggttctgtgcgggcaggttcccggacaagaccgaggccacaatcgga
gtagacttcagggagaaaattatcgaaatcgacggagagaaaattaaggtccagttatgg
gacacggctgggcaggagcggttcaggaagagcatggtgcagcattactaccgcaacgtg
cacgccgtggtcttcgtgtatgacgtcaccaatccctccagcttccagaacctgccatcc
tggattgaggagtgccggcagcactccctgggcagtgaggtgcctcgcctactggtgggc
aacaagtgtgacctgcgagagtcggtccgggtgagcacagaccaggtgcagaagttcgcc
gactcccaaagcatgccgctctttgagacctcggccaagaacccggacgacaacgaccat
gtagaagccatcttcatgaccctggcccacaaacttaagagccagaagccactgatgctg
agccagccggctggtggggagaacagtgtgcggctaaagccagaacaaaagctacctggc
gtttgttggtgctga
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