Polyodon spathula (Mississippi paddlefish): 121330579
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Entry
121330579 CDS
T07273
Symbol
tdrd5
Name
(RefSeq) tudor domain-containing protein 5
KO
K18407
tudor domain-containing protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121330579 (tdrd5)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121330579 (tdrd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OST-HTH
TUDOR
Bac_small_YrzI
Motif
Other DBs
NCBI-GeneID:
121330579
NCBI-ProteinID:
XP_041133130
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All DBs
Position
18:complement(16994562..17043571)
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AA seq
942 aa
AA seq
DB search
MSAQEHLLGALKKDVRSLLISAKTGLTPQQLQKDYMTMMGHRLPLHTLGYRSVMDMVQDL
PDVVQVQCAGDGSVLLKAIGDESTRGMEELVSKQRSNKRRSAINSQRSAPIHSMLPLHRR
RHVPPSLPAPLRSELKKLLSSSPVLLCQLERSFSQRFGRPLQIHHYGFYSVAELLSAAGD
MITVQQTRAGSLLVLKRQDYPARSRALQCSTGHVKKSPNKVIQHVFESALLSDDVKKPSP
SNLVKQIPQSNCLKHPQAPPKKEETITVKKQLSPEEIEFEKCIKKLEEELKTKILDSGPA
GTVSPELKEKIRQVVSQKPEGLLVKNLPEEFKKLFKEDLPVNQSGFLSVTDLVSALSDTL
YVDQGEADVNTNWIVFDAQQKQAQQRKKDLSETQAPELSQPLNPSDRSYFFHCDVSKWES
GDLEEEQANKLQYDSELKVVTEKFQQSLEMYEPILSQLEARLEVPPDAIQNERLQLVAEK
KEKAFVSVLVESVISPSQFYIRFCGTEEAKVLENIMIEMRGCYSFSEVSERYRLPAIYIR
AGQVCCVSPGGIWFYRVIIHRVVNETEVEVYYVDFGNLGFVEKSSLKFLKSCYSKLPAQA
VPSILTWIKPFKGVWSEKAVSQFQKLCCAKPMVAVIHKYVEGILHLFLCDTYTDADIYIH
CVLQIQGYAVPCSISDIGQPFGEFNPVALYLKWQTDLPNPVTEEEKTKKQAPLSGRDADR
MLYLEPTPVRADCWEREMDFSDLPELEFEGNLEDSLQEQPAERSNPFSALLQSESVPTTV
WDEDWGQRSPMKTKTASCREALWAQSRDLRAPSPQQTVPVLNKPDSFPDPQDERYMTLSH
CQPVAEGTAASPACLVPEEAPQVCVQAGELENKGELSSTPDLQVKRDSVPLAVQTQRLAR
LLFPLSRNTFCVPQTSASSVLGPAARLATATQLVEWFSYKKV
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcaggagcacttgctgggtgctctgaagaaggatgtgcgatctctgctcatc
tctgccaagactggcctgactccccagcagctgcagaaagactacatgacgatgatgggt
cacaggctcccgctgcacactctggggtaccgctcggtcatggacatggtgcaggacctg
ccggacgtggtgcaggtgcagtgtgcaggagacgggtcagtgctgctcaaagctatcgga
gatgaaagcaccaggggcatggaggagctggtgtccaaacagaggagcaacaagaggcgc
tcggccataaacagccagcgcagtgcgccgattcactccatgctccccctgcaccggcgg
agacacgtgcccccttccctcccagccccccttcgcagcgagctgaagaagttgctgtcc
tcctcaccggtcctgctgtgccagctcgagcgctccttctctcagcgcttcggccggccc
ctgcagatccatcactatggcttctactctgtggcggagctgctgagtgcggcaggggac
atgatcacagtgcagcagacccgagcaggctccctactcgtactgaagagacaggactac
ccggccaggagcagggctctgcagtgctccacaggtcatgtgaaaaagagccccaataaa
gttattcaacatgtgtttgaatctgccctcctatctgatgacgttaagaaaccttcccct
tcaaacctggtgaagcaaattccacaatccaactgcctaaaacatccacaggcccctccc
aagaaggaggagaccatcacagtcaagaagcagctgtctccagaagagattgaatttgaa
aagtgtataaagaagttggaagaagagctgaagaccaaaatcctggacagtgggccagca
gggactgtcagccccgagctgaaggagaagattcgacaggtagtctctcaaaagccagaa
ggtttattagtgaagaacctgcctgaggagttcaagaaattgttcaaagaggacctgcct
gtgaaccagagcgggttcctgagtgtcacggacttggtgagtgctctgagtgacactctg
tatgtagaccagggggaggctgacgtgaacaccaactggatcgtgttcgatgcacagcag
aaacaggctcagcagaggaagaaagatttgtcagagacccaagcccctgagttatcgcag
cccttgaatccctcagacaggagctacttcttccactgtgacgtttctaaatgggagagc
ggggacttggaggaggagcaggcaaataaactgcagtacgacagtgagctcaaagtggtg
accgagaagttccagcagtccttggagatgtacgagcccatcctatcccagctggaagcc
cggttggaagtccctcctgacgcgatccagaacgaacgcttgcagctggtggcagagaag
aaggagaaggcatttgtgtctgtgctggtggagagcgtcatttcccccagccagttctac
atccgcttctgtgggactgaagaagcaaaggtgctggagaacataatgattgaaatgaga
ggctgttattccttctcggaggtgtcggagcgctatcggctgccagccatctatatccgt
gctgggcaggtgtgctgtgtgagcccaggagggatctggttctaccgagtcatcatccac
cgcgtggtgaacgagacggaggtagaggtttactacgtggacttcgggaacctgggcttc
gtggaaaagagcagcctcaagtttctcaagtcctgctattcaaagcttcctgctcaggcg
gtgccatccattctgacgtggataaaaccgtttaagggtgtctggagtgagaaggcagta
agccaatttcagaagctgtgctgcgctaagccgatggtggctgtgatccacaagtatgtg
gagggaatcctgcacctcttcctgtgtgatacctacacagatgcggatatctacattcac
tgcgtcctgcagatccagggctacgctgtgccctgcagtataagcgacatcggccagccc
tttggagagttcaacccagttgctctgtatctgaagtggcagacagacctgccaaaccct
gtaacagaagaggagaagacgaagaaacaggccccgctgtctggcagagatgctgacagg
atgctgtacctggagcccaccccggtcagagcggattgctgggagagagagatggacttc
agtgacctcccagagctggaattcgagggcaatctggaggacagcttgcaggagcagcca
gcagaaaggtccaatcccttctcggctcttctgcagtcggagtcagtgcctactacagtc
tgggatgaggactggggacagaggagcccgatgaaaaccaagacagcgtcctgcagggag
gccctctgggctcagagcagggacctgcgggcaccgagtccacagcagacagtacctgtg
ctgaataaaccagactccttcccagacccccaggatgagaggtacatgaccctgtcccac
tgccagccagtagcagaaggcactgccgcctctccagcctgcctcgttcctgaagaagct
ccacaagtctgtgtccaggccggggagcttgagaacaaaggagagctctcctcaacgcct
gaccttcaggtgaagagggattccgtgccactagctgtccagactcagcgcttagccagg
ctgctgttccctctgagcagaaacacattctgtgtgccccagacctctgcatcatccgtg
ctgggaccagcagctcgactagctacagccacccagctcgtggagtggttttcatacaag
aaagtgtag
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