Polyodon spathula (Mississippi paddlefish): 121330605
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Entry
121330605 CDS
T07273
Name
(RefSeq) nocturnin-like isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121330605
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
121330605
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121330605
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
121330605
NCBI-ProteinID:
XP_041133177
LinkDB
All DBs
Position
2:complement(14339015..14357885)
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AA seq
442 aa
AA seq
DB search
MYQSPVRLCSTPLQTVIPGLRSSSLRSPVRKVAEFKKISAPAPLFCHTVCTDSLTTGKTV
TTATATGPLLPVSRTVCSMGSSTSRLYSAVAQKLSSSPAPQHEEYSEQPVHVVPIDPDDL
LKECEKALLNRPARVQRAFAFPRNDKPSTPHRPIRVMQWNILAQALGEGKDNFVNCPLDA
LNWAERKYLILEEILMHRPDILCLQEVDHYFDTFQPILNSMGYHSSFLPKPWSPCLDVEH
NNGPDGCALFFNQDRFELVDSTNMHLVAMMLKTNQVAIAQTLRCKETGRLFCVAVTHLKA
RSGWERFRSSQGSDLLQNLQSITEGTGIPLLICGDFNAEPTEDVYRDFATSSLNLNSAYK
LLSEDGQSEPPYTTWKIRPSGESCHTLDYIWYSQHAFSVDSVLDFPTELQIGPNRLPSYN
YPSDHLSLVCDFSFNDEPDRLL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaagtccagtccggctgtgctcgaccccgctacagacagttatcccgggactt
cgttcctcttcgttgaggtctcctgtcagaaaagtggctgagttcaaaaagatttctgcc
ccggcacctttgttttgccataccgtttgtacggacagtctaaccaccggcaaaacggtg
actacagccacagccacaggaccacttttgcctgtgtcaagaacagtgtgttccatgggc
agcagcaccagcaggctgtatagcgctgtggcccagaagttaagcagcagtcccgctccc
cagcacgaggagtacagcgagcagcctgtccatgtggtgcccatcgacccagatgacctc
ctcaaggagtgcgagaaggccctgctcaaccggccggccagagtgcagcgagcctttgcc
ttccctagaaacgacaaacccagcactcctcaccgtccaattcgagtcatgcagtggaac
atcctcgcacaagctcttggggaaggaaaagacaattttgttaattgtccgctggatgct
ttgaactgggcagagcgcaagtaccttatccttgaagagattctcatgcacaggccagat
atcttgtgcctgcaggaggtagatcactactttgacaccttccaacctatcctgaacagc
atgggctaccactccagcttcttgcccaagccctggtcgccctgcctggacgtggagcac
aacaacggaccagatggctgtgctttgttctttaaccaggacaggtttgagctggtggac
agcactaatatgcatctggtagccatgatgctgaagaccaaccaggtggctatagctcag
accctgaggtgcaaggagacagggaggctgttttgtgttgccgtcacccacctcaaagcc
cgcagtggctgggagaggttccgctcttcccagggctccgatctccttcagaatctgcag
tccatcacagaggggactggcattcccttgctgatttgtggggacttcaatgcagagccc
actgaggatgtctatagagactttgcgacctccagcctcaacctgaacagtgcctacaag
ctgctcagcgaggatggccagtctgaacccccctacaccacatggaagatccgtccgtct
ggggaaagctgccacacgctggattacatttggtactcacaacatgccttcagcgtggac
tctgttttggacttccctacagaactgcagattgggcccaataggctgccatcttataac
tatccttcagaccatctgtcattagtctgtgattttagttttaatgatgaaccagacaga
cttttatag
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