Polyodon spathula (Mississippi paddlefish): 121330650
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Entry
121330650 CDS
T07273
Name
(RefSeq) dynactin subunit 1-like isoform X2
KO
K04648
dynactin 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04814
Motor proteins
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121330650
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121330650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121330650
03036 Chromosome and associated proteins [BR:
pspa03036
]
121330650
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121330650
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121330650
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
121330650
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
121330650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Baculo_PEP_C
Gemin7
DsbC_N
Motif
Other DBs
NCBI-GeneID:
121330650
NCBI-ProteinID:
XP_041073565
LinkDB
All DBs
Position
1:complement(107101789..107203453)
Genome browser
AA seq
1270 aa
AA seq
DB search
MALTKRHTYNRVLSSSSSSRMSSDGSSKLAKVGSRVEVIGKGHRGTVAYIGATLFATGKW
VGVILDDAKGKNDGTVQGKRYFTCEDNHGIFVRQSQIQPVDDGADTTSPETPEPLSSKVP
KREPLETPKSSKLRGVKPKKTPTPRKTPARRTKPTRPSSSAASSGTAGPSASASGGDMSS
SEPSTPLVAPVIPTPSMGLTSPGAHPHPTPSKEEEALRVQVKDLDEKLETLKMKRSEDKA
KLKELEKYKIQLEQLQEWKSKMQEQQTDVQKQLKEAKKEAREALEAKDRYMEEMADTADA
IEMATLDKEMAEERAESLQQEVDSLKEKVEELTMDLEILKHEIEEKGSDGAASSYHVKQL
EEQNGRLKEALVRMRDLSASEKQEHVKLQKQMEKKNSELEILRQQKEKLVEEMTQAEKTI
DELKEQVDAALGAEEMVETLTERSLDLEEKVRELRETVSDLEAINEMNDELQENARETEL
ELREQLDLGSARVREAEKRVEAAQETVADYQQTIKKYRELTAHLQEVNRELMSQQEATAE
QQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVSQANRQVSLLTSFMPDSFLRHGGDHD
CILVLLLIPRLICKAELISKQAQEKFDLNEDCVARPGLRGAVGEQLSFAAGLVYSLSLLQ
ATLHKYEQALNQCSVEVYKKIGTLYPEMSVHERSLDFVIDLLHKDQLDETVNVEPLTKAI
KYYQHLYSIHLTEQPEDCTLQLADHIKFTQSALDCMGVEVGRLRVFLHTGQEAADLAVLL
KDLETSCSDIRQFCKKVRRRMPGTDVPGIPAALTFGPSVSENLMDCRKHLTWVVAVLQEV
AAAGAQMIAPLSEQEGLSALKLEDIAFKVGEQIYGAQGVSPYDCMRQSCSIVIATMNKMA
TAMQEGEYDADRPQDRPTPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKRCLKIKG
EELSEASVRLSLLEKKLDSSSKDADERVEKIQTKLDETQALLKKKETEFEETMDALQADI
DQLESEKAELKQRLNNQSKMTIDGLQRTPATGIASVVTGVATGVGSTQSMGGGSGPVQVI
DSPLLLQQIDAQRLGIKYLKNENNRLKAEKMNAQLASLPPLRVSKLPLKEGVNTDLQSNP
LYRKTSQLLETLLQMSANMKVVDITGKTPVSPTAQLMEQTAHLKSLSDTLDRLKDEVAEH
VVSQRPGARVPSDFATFPSSSFVKAQVEQKDDTVLIGRVMFPCARGQEQIHRVVLTQPQL
HKMHRLLLSS
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaccaaaagacacacatacaatcgggtgctgagcagcagcagcagcagcagg
atgagctctgacgggagcagcaagctggccaaggtgggctcccgcgtggaggtgatcggt
aaggggcaccgcggcaccgtggcatacatcggagccaccctgttcgccaccggcaagtgg
gtgggagtcattctcgatgatgccaagggcaagaacgacggcacggtgcagggcaagagg
tactttacttgtgaagacaaccacggcatctttgtccgacagtcgcagatccagccagtt
gatgatggagcagataccacttctccagagacccctgaacccttgtcttcaaaggtccct
aaacgagagccattggaaacacctaaatccagcaaactgcgaggagtgaaacccaagaag
accccaactcccaggaagaccccagccaggcggaccaagccgacgagacccagcagctcg
gcagcgtccagcggcacggcgggcccttcagcgtcggcctccgggggggacatgagcagc
agcgagccgagtacccccctggtagcacctgtgatccccacccctagcatggggctcacc
tctccaggagcccaccctcacccgactcccagcaaggaggaggaggccctgcgtgttcag
gtgaaggacctggatgaaaagctggagactctgaagatgaagcgcagcgaggacaaggcc
aagctcaaggagctggagaagtacaagatccagctagagcagctgcaggagtggaagagc
aagatgcaggagcagcagactgatgtgcagaagcagttgaaggaggccaaaaaggaagcc
agagaggctctggaggcgaaggaccgctacatggaggagatggcagacactgcagatgcc
atcgagatggccactctggacaaggagatggctgaggagcgagcagagtccctacagcag
gaggtggactccctaaaggagaaggtggaggagctgaccatggacctggagatcctcaag
cacgagatcgaggagaaaggatctgacggagctgcctccagttatcatgtgaaacagctc
gaggaacagaacggcagactgaaggaggcacttgtcaggatgcgagacctgtcggcctca
gagaagcaggagcatgtgaagctgcagaagcagatggagaagaagaactcagagctggag
atcctgcggcagcagaaggagaagctggtggaggagatgacgcaggccgagaagaccatc
gatgagctgaaggagcaggttgatgctgctctgggcgcagaggagatggtggagacacta
acggagagaagcctggatctggaggagaaagtgagggagctgagagaaaccgtcagtgac
ctggaggccatcaatgagatgaatgatgagctgcaggagaacgcgcgggagactgagctg
gagctgcgggagcagctggacctgggcagcgcacgggtcagagaagctgagaagagggtg
gaagctgcgcaagagactgtcgctgactaccagcagaccatcaagaagtaccgggagctg
accgctcacctgcaggaggtgaaccgggagctgatgagtcaacaggaggccacagcagag
cagcagcagcctcccgcggagatgtttgacttcaagatcaagtttgcagagaccaaggcc
tacgcgaaggcaattgaaatggagctgcggaagatggaggtgagccaggcaaaccgacag
gtgtctctgctcacctccttcatgccggactccttcctgcgtcacgggggcgaccacgac
tgcatcctggtgctgctgctcatccctcgcctcatctgcaaggctgagctgatcagcaag
caagcccaggagaagtttgacctgaatgaggactgcgtggcaaggccaggcctgcgggga
gcagtgggagagcagctgagcttcgctgcaggactggtgtactcactcagcctgctccag
gcaaccctgcacaaatatgaacaagctctgaaccagtgcagtgtggaggtttataagaag
attggtacactgtatccagagatgagtgtccatgaacgctccctggactttgtgatcgat
ctcctccacaaggaccagctggatgagaccgtcaacgtggagcccctcactaaggctatt
aaatactaccagcacttgtacagtatccacctcacagaacaacctgaggactgcaccctg
cagcttgctgaccacatcaaatttacccagagtgccttggattgcatgggggtggaggtt
ggcagacttcgggtgttccttcacacgggacaggaagctgcagatcttgccgtcctgctg
aaggacttggagacgtcctgcagtgatatccggcagttctgtaagaaggtccgccgccgc
atgcctgggacagacgtgcctgggatcccagccgcgctcaccttcggaccatcggtgtct
gagaacctgatggactgtcggaagcaccttacttgggtggtggcagtgctgcaggaggta
gctgcagctggggcccagatgatcgcccccctcagtgagcaggagggtctgtctgcactc
aaactggaagacatcgctttcaaagtaggggaacagatctacggtgcccagggtgtcagc
ccctacgactgcatgcgccagtcctgcagcatcgtcattgccaccatgaacaagatggca
acggccatgcaggaaggggagtacgatgccgacaggcctcaggacaggccaactcctcca
gtagagctgagagcagcagcactgagagcggagatcaccgatgcagaggggctggggctc
aaactggaggacagagagaccgtcatcaaggagcttaagaggtgcctcaaaatcaagggt
gaggagctgagcgaagccagtgttcgcttgagtctcctggagaagaagctggacagctct
tcaaaggacgcagacgagagggtggagaagatccagaccaagctggacgagacccaggcg
cttctcaagaaaaaagagacggagtttgaggagacgatggacgctctccaggctgacatc
gaccagctcgagtcggagaaggcggaactgaagcagcgtctgaacaaccaatccaaaatg
accatcgatggtctgcaaaggacaccggccacggggatcgcttccgtcgtcactggggtt
gcaacgggggtcggcagtacgcagtccatgggcggtggttccggcccagtccaggtgatc
gactctcctctgctgcttcagcagattgatgctcagcgactcggcatcaaatacctcaag
aacgagaacaaccggctcaaggctgagaagatgaatgctcagctggcatccctgccacct
ctgcgtgtttccaaactgccgttgaaggagggagtgaacacagacctgcagtccaacccc
ctgtaccgcaagaccagccagctgctggagacgctgctgcagatgagcgccaacatgaaa
gtggtggacatcaccggaaaaacaccagtgagccctactgcacagctcatggagcagact
gctcatctgaagagcctgagtgacacactggacagactgaaggatgaagtggccgagcac
gtggtatcccagcgtcccggcgcccgagtgccctcggacttcgccacatttccctcctcc
tccttcgtcaaggctcaggtggagcagaaggatgacactgtgctcatagggagggtgatg
ttcccctgtgcccgtgggcaggagcagatccacagggtcgtcctaacacagccacagcta
cacaaaatgcaccgcctgctcctctcctcctag
DBGET
integrated database retrieval system
