Polyodon spathula (Mississippi paddlefish): 121330697
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Entry
121330697 CDS
T07273
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 6-like
KO
K08621
a disintegrin and metalloproteinase with thrombospondin motifs 6 [EC:3.4.24.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121330697
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121330697
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP_1
ADAMTS_CR_2
Reprolysin_5
Reprolysin_2
Reprolysin_3
ADAMTS_CR_3
PLAC
Reprolysin_4
TSP1_spondin
TSP1_CCN
DUF3152
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
121330697
NCBI-ProteinID:
XP_041133358
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Position
18:complement(18264092..18330465)
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AA seq
1087 aa
AA seq
DB search
MVVGSISEDFLKELGDYEWVVPERLDYHGDFLSYEVTSPWRRDRARRSLESSSNGIPESQ
LFYRVSAYGKLFHLNLTLNTNLVSEHFTVEYWDGQGLEWRHGYVEDCHYVGHIHSQNMES
TVAISNCNGLRGVIVTSDEEYFIEPAQNSSTLTPSAHHHVLYRRSAVQQLQRRVEMRCGV
TDDYVGSSRPWWLQNAPSHTTPRWRESRAQAERGRRSISTERFVETMVVADKMMVGYHGR
GDIEHYLLTIMNVVAKLYHDASIGNAIHIVVTRLVLLTEDQPNLEINHHADKSLDSFCKW
QKTLNTQSQDSKASGIPHHDNAVLVTRYDICTYKNKPCGTLGLAPVSGMCEPERSCSINE
DIGLASAFTIAHEVGHNFGMNHDGAGNPCGTKDNESARIMAAQLASNTDPFAWSACSRKY
ITRFLDSGRGDCLKNSPPKRVFAYPTSLPGQQHDADEQCRFQYGSASRQCNYGEVCRELW
CISKNNRCITNSIPAAEGTVCQTSTIDQGWCYQGLCVLLGTQPNQVDGLWGPWSSWGQCS
RTCGGGVALSYRRCDSPVPSHGGKFCLGERKRYRSCNVEDCPDNSVDFREKQCSDFDQRP
FRGKYYTWKAYTGGQMKACSLNCIAEGYNFYTERAPAVIDGTPCYSDSTDVCINGECRRV
GCDRQLGSEMVEDECRVCGGDGSLCERVQGEFNVTLPRGAYQEVVLIPKGAIHIKVSEVV
VSKNYLALKSIGGDFYINGGWTIDWPRKFTLAGTTFNYKRPVDEPESLEALGPTTEFVVV
MVLLQEPNQRIQFSFNVPVSRSGSGEAEDVAFTWQFTPWTECSTTCAGGTQKQEVVCWKL
DDGSLVHSSYCDPTIKPLGQQRRCSEEPCPAEWFIGEWGECSRSCGGGEHSRVVLCVRRL
GPVEEETLEERQCLTKQPRDREVCSTQDCPQRWVTHDWSECNPSCGPGFKHRIVECKSSD
LNRTFPASRCAEEMKPPVSMRCNLGRCPPPRWLAGAWGPCSAQCGQGQQLRTVQCLMHSG
QLTDKCEDSLRPAPTQQCVSKCDLSPSIHTEDCKDVNKVAYCPLVLKFKFCNRAYFRQMC
CKTCQTH
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttggttcaatctcagaagactttttgaaggagctcggggactatgagtgggtg
gttccggaaagactggattaccatggagattttctcagctatgaagtcacttccccctgg
aggcgggacagagcaaggcggagtctggagtcgtcttccaatgggatccctgaatcacag
ctgttctacagagtctcggcctatgggaagctctttcatctgaacctaaccctgaacacc
aatttagtctcggagcatttcaccgtggaatactgggatgggcagggtctggagtggcgc
catggttacgtggaggattgtcattatgtaggccacatacacagccagaacatggagtct
acagtagcaataagtaattgcaatgggctgcgtggtgtgattgtgacttcagatgaggag
tacttcattgaaccggcccagaacagctccacattgactcctagtgcccaccaccatgtg
ctgtacaggcgttcagcagttcagcagctgcagcgcagggtagagatgcgctgtggggtc
acagatgactatgttggcagctccaggccgtggtggctgcagaatgcccccagtcacact
accccccgctggcgggagtctagagcacaggctgaacgaggccggcggtccatcagcacg
gagcgctttgtggagactatggttgtggctgacaagatgatggtgggatatcacggccga
ggggatattgagcactacctactcaccatcatgaatgttgttgccaaactctaccatgat
gccagtattggcaatgctattcacattgtggtgactagactggtgctactgacagaagac
cagccaaacctggagatcaaccaccatgctgataaatccctggacagcttctgtaagtgg
caaaagacactgaacacgcagagccaggacagtaaagccagcgggatcccccaccatgac
aacgctgtgcttgtcacccgctacgacatctgcacctacaagaacaagccatgcgggacc
ctggggctggccccagtctcagggatgtgtgagccagagcggagctgcagcattaacgag
gatattggcttggcttctgccttcaccatcgcgcacgaggtcgggcacaattttgggatg
aaccacgacggggcaggaaacccctgtggaaccaaagataatgagtcggccaggatcatg
gcagcccagctggcatccaacaccgacccctttgcctggtctgcctgcagccgtaaatac
atcacacgcttcttagactcaggtcgtggtgactgtttgaagaactctcccccgaagcga
gtctttgcgtaccccacctctctccctggacagcagcatgatgcagacgagcagtgcaga
ttccagtatggcagcgcctcccgtcagtgcaactacggggaagtgtgtagagagctctgg
tgcattagcaagaacaaccgctgcatcaccaacagcatcccagctgcagaggggactgtg
tgccagaccagcaccatcgaccaggggtggtgttaccagggactgtgtgtgctgctgggg
actcagcccaatcaggtggatggattgtggggtccctggtcctcttggggacagtgcagt
cggacgtgtggtggaggagttgccttatcctacaggcgatgtgacagcccagttccctca
catggaggtaaattttgcttgggagagagaaaacgctacagatcctgcaatgtggaggac
tgtccagacaattcagtggatttccgtgaaaaacaatgttctgactttgatcagcggccc
ttcagagggaaatactacacctggaaggcgtacactggtggtcagatgaaagcatgctca
ttaaactgcattgcggaaggttataacttctacacagagcgtgctccggctgtgattgac
gggactccttgttactctgactccactgacgtctgcatcaatggtgaatgcagaagagtg
gggtgtgaccggcagctgggctctgagatggtggaggatgagtgccgggtgtgtggagga
gacggaagcttgtgcgagagagtgcaaggagagttcaatgtcacgttgccacgtggagct
taccaggaggtggtcttgatcccaaaaggagccatccatatcaaagtctcagaagttgtt
gtgtccaaaaactaccttgcgttgaaatccataggaggagatttctacatcaatgggggc
tggacaatcgactggcccaggaaattcactctggccgggactactttcaactacaagagg
ccggtagacgagccagagtccttggaagcccttggaccaaccacagaattcgtggttgtc
atggtgctgctacaggagcccaatcagaggattcagttcagcttcaacgtgccggtgtct
cgctcagggagtggagaggcagaggacgtggctttcacctggcaattcacaccctggaca
gaatgctccactacctgtgctggagggacccagaagcaggaagtcgtctgctggaagtta
gatgatggctccctggtccacagcagttactgtgatcctactataaaacctctaggccag
caaaggcgctgcagtgaggaaccctgtccggctgagtggtttatcggggagtggggagag
tgcagccggagctgtgggggaggggagcactctcgggtggtgctgtgtgtcaggaggctg
ggcccagtggaagaggagactctagaggagaggcagtgcctcaccaagcagcccagagac
agggaggtctgctccacacaggactgcccccagcgctgggtcacacatgactggtctgag
tgcaacccgtcatgtggccctgggttcaagcacaggatcgttgagtgcaaaagcagtgac
ctgaacaggaccttccctgcatctcgctgcgctgaggagatgaagcctccggttagcatg
cgctgcaacctgggccgctgccctcctccgcgatggctcgctggggcatgggggccgtgt
tcagcacagtgcggtcaaggacagcagctgcgaacagtccaatgtctgatgcacagcggc
cagctaacagacaagtgtgaggattctctgcggccagcccctacccagcagtgtgtgtcc
aagtgtgacctcagccccagcatccacactgaagactgcaaagatgtcaacaaagttgct
tactgccccctggtcttaaaattcaaattctgcaacagagcgtacttcagacagatgtgc
tgcaagacatgtcagacacattga
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