Polyodon spathula (Mississippi paddlefish): 121330741
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Entry
121330741 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121330741
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121330741
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121330741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_2
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121330741
NCBI-ProteinID:
XP_041133394
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All DBs
Position
18:complement(34283540..34288234)
Genome browser
AA seq
246 aa
AA seq
DB search
MGTHCSGLSTRFDLINDHTGLQSLSTLSMVLPRDVCCYLPVNYKESHAQSRLCFHNDSHC
PVCLQTATFPVETNCGHLFCAPCLIEYWRHGSWLGAISCPLCRQQVSILCNLFHENQVPL
YAESCGDQSPGPPGLTALPSGSVQVADYLYDMPLFLSLALRGQFTMGGLVWIFCLRIAVC
CCGAVVSLSSLLGVFPEPLCGVLGAVDHLMVVFLLLICMININQQMGPERANIANSTTQG
VLLDSL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgggtactcactgctcaggtctgagcacaagatttgacctaattaacgaccacacagga
ttgcaaagtctaagcaccctgagcatggtccttccgagagacgtctgctgttacttgcct
gttaattacaaagaatcacatgcacaaagcaggctgtgtttccacaatgactcccactgc
cccgtgtgcctgcagacagccaccttccccgtggaaacgaactgcggacacctcttctgc
gctccctgtttaattgaatactggaggcatggctcgtggcttggagcgatcagctgccct
ctctgcagacaacaagtgagtattctgtgcaacctctttcatgaaaaccaggttcctcta
tacgcggagtcgtgcggggatcagtctccaggcccgcctgggctcactgcgctgccctct
ggttctgtgcaggttgcggattacctctacgacatgcctctgttcctcagcctggccctg
agggggcagttcaccatgggcgggctggtgtggatcttctgcctgaggattgcggtgtgc
tgctgcggggccgtcgtgtcactctcctccctgctcggcgtctttccagagccgctgtgc
ggggtcctgggggccgtggatcatctgatggtggtgttcctcctgctcatctgcatgatc
aacatcaaccagcagatggggccagagagagccaacattgccaacagcaccacgcaagga
gtgctgttagactcgctgtag
DBGET
integrated database retrieval system
