Polyodon spathula (Mississippi paddlefish): 121330763
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Entry
121330763 CDS
T07273
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspa03032
]
121330763
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121330763
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121330763
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121330763
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
121330763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
Mg_chelatase
AAA_7
ABC_tran
AAA_5
RsgA_GTPase
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
121330763
NCBI-ProteinID:
XP_041133433
LinkDB
All DBs
Position
18:complement(30192991..30199134)
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AA seq
641 aa
AA seq
DB search
MLPGTEAAEIQCCATVEQLNSAGQTTKRQAIRRALVTLGRNELREMILRVHDGKVHQSFL
LREFQLFTRFARDGKSTIKLVPDNIQVLISDCPPDRLNIFLKTLSIKHQAFKQEGKPLGD
RARMLAGLPRSFETISPLQLKDVQKANELRGKVNADSPTKHKGMKERAGNRAGSLQVKRQ
RTDSDSHCPVKSLHPAKKPALALPVGRKLSTEQSLVLSAVLSGKNVFFTGSAGTGKSFLL
KRIVGSLPPKSTYATASTGVAACHIGGTTLHAFAGIGSGSAPLEQCLELALRPGVLQHWT
SCRHLIIDEVSMVEGEFFDKLEAIARSIRRSSEPFGGIQLIVCGDFLQLPPVTKGKEKIK
FCFQSRSWRKCIHVNMELTEVRRQTDKTFISLLQAVRLGRVTEEDTAQLMRTTYHKIEKD
GILATRLCTHKDDVELTNEKKLQQLPGESRIFEALDSDPQLVKMIDAQSPVGRVLQLKVG
AQVMLTKNLEVQKGLVNGARGVVVGFETGNKGFPLVRFLCGVTEVMKMQRWMFKAGNGIY
LSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLQGLRVMDFDP
KVVRANPEVLQFYSKLRKERLLLQASMEMYVGRGNKENEPL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccggaacagaggccgctgagatccagtgttgtgccacagtcgagcagctgaac
tctgctggccagactaccaagcgacaggccatccgccgcgctctcgtgactcttggccgc
aatgagcttcgagagatgatcctgcgtgtgcatgatggcaaagtgcaccagagcttcctt
ctgcgggaattccagctcttcacccggtttgctcgggatggcaagagcaccattaagctg
gtccctgacaacatccaggtcctgatctcggactgccccccagaccggctcaacatcttc
ctcaagaccctgtccatcaagcaccaggcctttaagcaggaagggaagcccctgggggac
cgggccaggatgcttgccggcctccctcgcagctttgaaacaatcagccccttgcagctg
aaggatgttcagaaagcgaatgagctgcgagggaaggtgaacgcagactccccaactaaa
cacaaagggatgaaggagagagctggcaaccgagcaggaagccttcaggtgaagaggcaa
aggacagactctgactcacactgccctgtgaagtcgctccatcctgccaagaagccagca
ctggcgttgccggtgggcaggaagttgtcgacggagcagtctcttgttctcagtgcagtt
ctcagtgggaaaaacgtctttttcacaggcagcgctggtactgggaagtcttttctgttg
aagaggattgtgggatccctgccccccaaaagcacctatgccacagccagcactggagtg
gctgcctgccacattggaggcaccacactccatgcctttgcaggtatcggctcaggctcg
gcccccttggagcagtgtctggagctggctctgcgcccaggagtcctgcagcactggacc
agctgtcgccacctcatcattgacgaggtctccatggtggagggggaattctttgacaag
ctggaggccattgccaggtcgatcaggaggtccagtgagccgtttggagggattcagctg
attgtatgtggagatttcctgcagcttcctccagtcactaagggcaaggagaagatcaag
ttttgctttcagtcgaggagctggaggaagtgtatccatgtgaacatggagctaactgag
gtccggagacagacagacaagacgttcatctctctcctgcaagcagtacggctgggcagg
gtcactgaagaggatacagcacagctgatgagaaccacctaccacaaaattgaaaaggat
ggtatcctagcaaccaggctgtgcacacataaggacgacgtggaactgaccaatgagaaa
aagctccagcagttgccaggtgaaagccgcatatttgaggccctggacagtgacccacag
ctggtgaagatgattgatgcccagagtccagtggggcgggtgttgcagctgaaggtggga
gctcaggtgatgctaacaaagaatctggaagtgcagaagggcctggtgaacggggcacga
ggcgtggtggttgggtttgagactgggaacaaaggtttccctctggtgcggttcctctgt
ggggtcacagaggtcatgaagatgcaacgctggatgttcaaagctggcaatggaatctac
ctgagtcggcagcagctgcccctcaaactagcctgggccatctctatccacaagagccag
ggcatgtccctggactgtgtggagatctcgctgtcccgtgtgtttgagagcggccaggcg
tatgtagctctctctcgagcacgcagtttgcaggggctccgggtcatggacttcgacccc
aaggttgtgagagccaaccctgaggtgctgcagttctacagcaagctgaggaaggagcgc
ctcctcctgcaggcctcgatggaaatgtacgtggggagagggaacaaggaaaatgagcct
ctttag
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