KEGG   Polyodon spathula (Mississippi paddlefish): 121330774
Entry
121330774         CDS       T07273                                 
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
  KO
K14409  protein SMG7
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121330774 (smg7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121330774 (smg7)
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     121330774 (smg7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121330774 (smg7)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 TPR_2
Other DBs
NCBI-GeneID: 121330774
NCBI-ProteinID: XP_041133459
LinkDB
Position
18:24904058..24931898
AA seq 1265 aa
MMNLCTQYLRQAEALKVDMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTNTSAIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTVFYYCRSIAVKFPFPAASTNLQKSLSKALESRDEI
KTKWSVPDFVKAFIKFHGHVYLSKSLEKLNTLREKLEEQFQKLILQKAFSSQQLVHITVI
NLFELHHLRDFSSETDNHSYSQDEQLSWIQLLALFMSFLGVMCSRALLNKNREETLGECP
LPAIKVSLDWLKLRPVFHECSVNERQHIWPWLASLLNSFQAKEGDVSGASETPLPEEFEL
QGFLALRPALRYFLEFPLSVSLRARNLDFFKGHQGIVVVDKEGQQLRTRHQTLICLGKWV
AENHPRLLQCRSEEGVLVFVTDIPELDIEEPPENKDGPVLQESSNAEQTSNEGSQGLKSV
LSIGKTQNCSSECGEKPVVTFKENIKPREQSRDPTRNHHPKEGMKERRDYNKGNNMANKT
DLKKDKRKSEPKKSSNEKTTELGKQNVAVQVKAQSEVRKTPVSQTLTQTSSSSQFIPIHH
PGAFPPLPSRPGFPPPGYVIPPPVAFSMSPGYTFSTGVSVPGPFLQSATHPQTGSQVQAG
KQSHIPYSQQRPSGPGALNQGPQPQQGPQQPHTAPPPQQGQPPAPLQVQTMLQQQQSPTK
PGQQLGKSPPYPGMQQSKQLWNQHQTQLPIQKMPLQMPVKQSFYMQTQDPLKLFEQSLQT
IQMQQQQQVNMEKKLRQFPVEPFPQSTSDVEAQDFYWDSPYRMTDNRQMIGQQVNNERLV
KRQQGVFHTDQDSVPRVPSFEDTKSSSFLPPDLLKRLADFEEEELAFTKPHHFYQALAGP
LGTAPGRNLFLPNQLRLERPSELIAQPSSLLSLSGFSIQENTYQNNSIFSEAYGKNMATS
TKPEVTCSLSHQEPSLYSLFEGTPWSPSLPASSGLQQQEAQTRCVDDRPRASHPREISPV
QDQHIYLHPLRDRFRTAEQMARETTDHPHRRINSDTICCRDHSTPASQSPHSSNPSSLPS
SPPTHNHNSIPFSNFGPIGTPDSRDRRMGDRWKMEKSAMSGFGLDYLPAASSSASENSWH
KTSTPCSTWAAQESPMEESSTVLLDSLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGHGT
MNPPH
NT seq 3798 nt   +upstreamnt  +downstreamnt
atgatgaacctctgcacccaatatttacggcaggcagaggccctgaaggtggacatgaca
gattcaaagttgggtccagcagaggtctggacatcaaggcaagctctgcaggatctttac
cagaaaatgttggtgacagacctggagtatgctctggacaagaaagtggagcaagatctc
tggaaccatgcttttaaaaatcaaataacaacactacagagtcaagcgaaaaacagggcg
aatcccaataggagtgaagtgcaggccaatttgtcactttttcttgaggcagctagtggc
ttctacacacagttgttacaggagctgtgtacagtgtttaatgtggatctgccgtgccgg
gtgaaatcttcacaacttggaataataagcaataaacagactaacaccagcgccatcgta
aagccacaacctagttcatgctcttacatctgccagcattgccttgtccacctaggggac
attgcacgctaccgtaaccaaaccagccaggcagagtcttactacaggcatgcagctcaa
cttgtaccttcaaatggtcaaccatacaatcagctggctattttagcttcctcgaaagga
gatcacctcacaacagttttttactactgcagaagtattgcagtcaagtttccttttcca
gctgcttctaccaacctacagaagtctctttctaaggctcttgagagccgggatgaaata
aagaccaagtggagtgtaccagactttgtcaaagcctttattaagttccatggtcatgtg
tatttgagcaagagcctagaaaaactgaacaccctgagagagaagctggaggagcaattt
cagaaacttattcttcagaaggcgttcagctcacagcaacttgttcacatcactgtaatt
aacctgtttgaactgcatcacttgcgagacttcagcagtgagactgataatcacagctat
agtcaggatgaacagctcagctggatccaactgttggcactttttatgtctttccttgga
gtcatgtgcagtcgagcattgctgaataagaatcgggaggaaacattgggtgaatgtcct
ctcccagctatcaaggtttccttggattggctgaagcttagacctgtgtttcatgagtgt
tctgtaaatgaaagacagcatatttggccatggctggcatctcttttaaacagttttcag
gcaaaggaaggtgatgtttctggggcctcagaaacccctctaccagaagagtttgagctg
caggggttcttagccctcagacctgcacttaggtattttttggaattcccattgtcagtt
tcacttcgtgccaggaacctggatttctttaagggtcaccaaggcattgtagtagtagac
aaggaaggtcaacaactgaggacacgtcaccagactttgatctgtctaggaaaatgggtg
gcagaaaatcatcctaggctgcttcagtgcagaagtgaggagggtgttcttgtttttgtg
actgacatcccagaactagacattgaggagccacctgagaacaaagatggtccagtcttg
caggaatcttccaatgcagagcaaacttccaatgagggcagccaaggacttaaatcggta
ctttctattggcaagacccagaactgcagttcagagtgtggagagaaacctgttgtgaca
ttcaaagaaaatataaagcccagggagcagtctagggatccgacaagaaaccaccatcca
aaagaagggatgaaggaaaggagggactataataaaggcaataatatggcaaacaaaact
gatttaaagaaagacaagagaaagagtgaacccaagaaaagcagcaatgagaagacaaca
gagctaggaaagcagaacgtggcagtgcaggtaaaggcacaatctgaagtgaggaagact
ccagttagtcagactctgacacagacaagcagctcctcacagttcatcccaattcaccac
ccaggagcttttcctcctcttcccagcagaccaggattccctccacctgggtatgttata
cctccaccagttgctttttcaatgagccctggttacacgttctcaactggggtatctgta
ccaggacctttcctccagtctgccacccatccccagacaggtagtcaggtccaagctggg
aagcaatcgcacattccctacagtcagcagaggccatcggggccaggggctttgaatcaa
ggacctcagccacaacagggtccacagcaaccacacaccgcaccaccgccacaacagggg
cagcccccagctccgcttcaggttcagactatgttacagcaacagcagtcgccaactaaa
ccagggcagcagcttgggaaaagccccccttatcctgggatgcagcagtccaagcaactg
tggaatcagcaccagacacagctgccaatccaaaagatgccattacagatgcctgtaaaa
cagtcattttacatgcagactcaagatccactaaagctgtttgagcagtctcttcaaacc
atacaaatgcagcagcaacaacaggttaatatggagaagaaactgaggcagttcccggtg
gaacccttcccccagagcacttcagatgttgaagcgcaggatttttactgggattctcca
taccgcatgactgacaacaggcagatgattggacagcaagtaaacaatgagcgcttggtc
aagaggcaacagggggtcttccatacagaccaggacagtgtaccaagggtgccgtccttt
gaggacaccaagagctcctcttttctacctcctgatctgttaaaacgtttagctgatttt
gaggaggaagagctggcctttactaaaccgcaccatttttaccaggccttggccggccct
ctaggcactgctcctggaagaaacctatttttgccaaatcaattaaggctggaaaggcca
tcagagctgatagcacagccttcatcacttctctccttgtctgggttttcgattcaggag
aacacctatcaaaataacagcattttcagtgaagcctatggtaagaacatggcaaccagt
acaaagccggaggtaacctgttccctgtcacaccaggagccttcgctgtactccctcttt
gaaggaactccatggtctccatcccttcctgccagctcagggctccaacaacaggaagca
cagaccagatgtgtagatgacagacccagagcaagccatcctagagagatttcccctgtc
caggaccagcacatctatctgcatcccctgagagatcggtttagaacagcagaacaaatg
gcccgagaaacaactgatcatccgcacaggcgcatcaacagtgatacaatatgctgccga
gatcactcaacaccagcaagccagtctcctcactcttccaaccccagcagcttgccttct
tccccaccaactcacaaccacaactccatccctttctctaactttggacccatagggacc
cctgacagtagggataggaggatgggtgatcgctggaaaatggaaaagtcagcaatgagt
ggatttggactggactatttgcctgctgcatcttcctctgcttcggaaaacagctggcat
aagactagcactccctgcagcacctgggctgcccaggaatcccccatggaagaatcctcc
actgtcctcctggacagtctgaagtcgatctggtcaagctcaatgatgcatcccggacct
tcagctttggagcagctgctgatgcagcagaaacagaagcagcagagggggcatggcaca
atgaacccaccacactga

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