Polyodon spathula (Mississippi paddlefish): 121330811
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Entry
121330811 CDS
T07273
Name
(RefSeq) far upstream element-binding protein 1-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121330811
03041 Spliceosome [BR:
pspa03041
]
121330811
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121330811
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121330811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
121330811
NCBI-ProteinID:
XP_041133557
LinkDB
All DBs
Position
18:complement(29878034..29887488)
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AA seq
682 aa
AA seq
DB search
MADYSNVAPPSSGSGGGMNDAFKDALQRARQIAAKIGGDGAGAPPASTNDFGYGGQKRPL
EDADDSWTSLSSRTHWEGMSSPFKDQPDSKKVASQNDPFGSPMGGMGASQRSVVTEEFKV
PDGMVGFIIGRGGEQISRMQQESGCKIQIAPDSGGLPDRSVMLTGSPDSIQSAKSLLGEI
VEKGRPGPVFHHSDGPGMSVQEILVPASKAGLVIGKGGETIKQLQERAGVKMVMIQEGPQ
NTGADKPLRITGEPFKVQQAKDMVMELIRDQGGFREQRNEYGSRMGGNDCGLDVSETQVP
VPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGTTPERIAQIMGPPDRSQHAAEIIGD
LLRSVQAGGPPGPGGRGRGRGQGNWNMGPPGGLQEFSFTVPTMKTGLIIGKGGETIKSIS
QQSGARIELQRNPPPNADPSLKMFTIRGSHQQIDYARQLVEEKIGGPVSPLGGPHGPPGP
HGGPAPHGPQGPPGPPAQMGPYNPGPYNQGPQGPHGPPAPYQPQGWGNGFPHWQQQGQQD
PGKAAADANAAAWAAYYSQYQQQPQAPIATSNAAPGSGQTNGQGDQQNPGQSGQADYTKA
WEEYYKKLGQHGQQPQDYTKAWEEYYKKQGQPAPASATPAAGQPDYSAAWAEYYRQQAAY
YGQGSPQAVPPHPPAPQAQQGQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggctgattattcaaacgtagctcccccatcttcgggctcaggcggcgggatgaacgac
gcttttaaagacgccctccaaagggctaggcagattgctgctaaaataggtggggatggg
gctggtgctcctccagccagtacaaatgactttggatatggaggtcagaagaggcctttg
gaagatgcagatgactcttggacaagtctgagcagtagaacacactgggagggaatgtcc
tctcctttcaaagatcaaccagactccaagaaggttgcctcccagaatgatccatttggc
tcaccaatgggaggaatgggtgcatctcagaggtcggtcgttacggaagagttcaaagtt
ccagatggaatggtcggatttataattggcagaggtggtgaacaaatatctcgcatgcag
caggagtctggatgcaaaatacagattgcaccagatagtggtggtcttcctgacagatca
gtcatgttaacaggttcaccagattcgattcagtctgcaaaaagtctgttgggtgaaatt
gtagagaagggacgaccgggacctgtcttccaccattcagatgggccaggaatgtcagtt
caagaaattttggttccagccagtaaagctggcttagtaattggaaagggtggagaaaca
ataaagcaattgcaggaacgtgctggagtgaagatggtgatgattcaggaaggaccacaa
aacacaggcgcagataagccactcagaattacaggagagccgtttaaggttcagcaagct
aaagatatggtgatggaacttatcagagatcaagggggatttagagaacaacgtaatgaa
tatggatcccgaatgggtggaaatgactgtggcttagatgtaagtgagacacaggtccct
gtgccacggtttgcagttggtattgtaataggtaggaatggggaaatgattaagaagatt
cagaatgatactggtgtcaggattcagtttaaaccagatgatggaaccacaccagagaga
atagctcagataatgggacccccagacagatcccaacatgctgcagaaattatcggtgac
ctcctgagaagcgtacaggctggtggacctcctggaccagggggccggggaagaggaaga
ggccaaggcaactggaacatgggtcccccaggtggacttcaggagttcagttttacagtt
cccactatgaagacagggctaatcattggaaaaggtggagaaactataaaaagtataagc
cagcagtctggtgcaaggatagagctacagagaaatcctcctcccaatgcagatcccagt
cttaaaatgttcacaatccgtggatcacatcaacaaattgactatgccagacagcttgtt
gaagaaaagattggaggtccagtgagtccattaggtggacctcatggcccaccaggacct
catggaggtccagccccacatggtccccaaggacctccagggccaccagctcaaatggga
ccttacaaccctggaccttacaatcagggaccccaaggacctcatggtcctccagcacca
tatcaaccacaaggatggggtaatggctttccacattggcaacaacaaggacagcaagac
cctggtaaagcagcagcagatgctaatgcagcagcatgggcagcttactattctcagtat
cagcagcaaccacaagcaccaatagcaacttcaaatgctgctccaggttcaggccagaca
aatggacaaggtgaccagcagaatccaggtcagagtggacaggcagattacacgaaggcc
tgggaggaatattacaagaaattgggccaacatgggcagcagccacaggattacacaaag
gcatgggaggagtactataaaaagcaaggtcagccagctccagctagtgctaccccagca
gctggccaaccagactacagtgctgcatgggcagagtactacaggcaacaggctgcatat
tacgggcagggaagccctcaggcagtgcctccgcatccaccagcaccacaagcacagcag
ggccagtaa
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integrated database retrieval system
