Polyodon spathula (Mississippi paddlefish): 121330812
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Entry
121330812 CDS
T07273
Name
(RefSeq) vesicle-trafficking protein SEC22b-like isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121330812
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121330812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121330812
Membrane trafficking [BR:
pspa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
121330812
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
Motif
Other DBs
NCBI-GeneID:
121330812
NCBI-ProteinID:
XP_041133563
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Position
18:complement(36325096..36343378)
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AA seq
260 aa
AA seq
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MKGGDKQGAQHSAAFPSSAGLKECEWRAGRSNCASFQAQLKMVLLTMIARVADGLPLAAS
MQEDEQGREQSGRDLQQYQSQAKQLFRKLNEQSPPRCTLEAGAMSFHYVIEKGVCYLVLC
EAGFSKKLAFAYLEDLQSEFDEQHGKRVPTVSRPYSFIEFDTYIQKTKKSYIDSRARRNL
GNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTRSTYAK
LAAVGVFLVMLIVYVRFWWL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggggagataagcaaggcgcacagcacagtgcagcgtttccgtccagcgcaggg
ctgaaggagtgtgagtggagagcaggtcggagtaactgcgcttcgtttcaagctcagttg
aagatggtgttgttgacgatgattgcccgggtcgcggatggactcccgctcgccgcatcc
atgcaggaggacgaacagggaagagagcagtctggacgggacctgcagcagtatcaaagc
caggccaagcagctcttcaggaagctgaatgaacagtcgcccccgcgatgcacgctggag
gcaggggccatgtctttccactacgtcatcgagaagggggtgtgctacctggtcctgtgt
gaggcggggttctccaagaagctggcgtttgcctacctggaggatttacaatcagagttc
gatgagcagcatgggaagagagtgcccacagtatccagaccgtactcctttattgagttc
gacacgtacattcagaagaccaagaagtcgtacattgacagcagagcccgacgcaacctg
gggaacatcaacacagagctgcaggatgtgcagagaatcatggtggccaacattgaggag
gtgctgcagagaggagaggcgctgtcagctttggactccaaggccagcaacctgtccagc
ctgtcgaagaaataccggagtgacgccaagtacctgaacacgcgctccacgtacgccaag
ctggctgccgtgggggtgttcctcgtaatgctgatcgtctacgtgaggttctggtggctc
tga
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