Polyodon spathula (Mississippi paddlefish): 121330821
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Entry
121330821 CDS
T07273
Name
(RefSeq) parafibromin-like
KO
K15175
parafibromin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121330821
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
121330821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_N
CDC73_C
PemK_toxin
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
121330821
NCBI-ProteinID:
XP_041133580
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All DBs
Position
18:23462148..23544801
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AA seq
531 aa
AA seq
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MADVLSVLRQYNIQKKEIVAKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPKEYYTLDSI
LFLLNNVHLPHPSYVRRAATENIPVVRRPDRKDLLAYLNGESSTSASIDRSAPIEIGLQR
PTQVKRAADDASSEAKKPRIEDEERVRLDKERLAARLEGHKEGIVQTDQIRSLSEAMSVE
KIAAIKAKIMAKKRSTIKTDLDDDITALKQRSFVDAEVDTTRDIVSRERVWRTRTTILQS
SGKNFAKNIFAILQSVKAREEGRAPEQRPTQNATQADPSLRNKQPVPAAYNRYDQERFKG
KEETEGFKIDTMGTYHGMTLKSVTEGASARKAQTPAVQPVPRPVSQARPPPNQKKGSRTP
IVIIPAATTSLITMLNAKDLLQDLKFVTSEEKKKQGFQRENEVLLQRRKDVVQPGGTNLS
VTVPYRVIDQPLKLAPQDWDRVVAVFVQGPAWQFKGWPWVLPDGSPVDIFAKIRAFHLKY
DEVKVDPNVQKWDVTVLELSHHKRHLDRPIFLRFWETLDRYMVKHKSHLRF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttgagtgtcctgcgtcagtataacatccagaaaaaagaaatcgtcgcc
aagggagatgaagttatcttcggcgaattctcctggcccaaaaatgtgaaaacgaactat
gtcatctgggggacagggaaggagggtcaacccaaagaatactacactttggattccatc
ttgttcctgctgaacaatgtgcatctccctcacccttcctatgtgcggagggctgcaaca
gagaacattcctgtggtgagaagacctgacagaaaagatcttctggcctatctaaatggc
gaaagttctacatctgcaagtattgacagaagcgcacctattgagattggtttgcaaaga
ccaacacaagttaaaagagcagcagacgacgcatcatcagaggcaaaaaagccaaggata
gaggatgaagagcgagtgcgtcttgacaaggagcggttggcagcccgtttggaggggcac
aaggaaggcattgtgcaaacagatcagattaggtctttgtcagaagccatgtccgttgaa
aagattgctgccatcaaagccaagattatggccaagaaaaggtcaacaatcaaaactgac
ttggacgatgatattactgcactgaaacagagaagttttgtggatgccgaggtggacacg
actcgagacattgtcagcagggagagagtatggcgaacaaggacaacaattttacaaagc
agtggaaagaactttgccaagaacatctttgcaattctccagtctgtgaaagccagagaa
gagggacgtgctcctgaacagagaccaacacagaatgcaacccaggcggatccttcctta
agaaacaaacaaccggtgcccgctgcttacaacagatatgatcaggaaagattcaaaggg
aaagaagaaactgagggtttcaagattgataccatgggtacttaccacggcatgaccttg
aagtctgtgacggaaggggcttcagccaggaaagcacagacaccagcagttcagcctgtt
ccaagaccagtttctcaggccagacctcctccaaaccaaaagaagggctcacgaacccct
atcgtcatcatccctgctgccactacttcattaattaccatgctaaatgcaaaggatctt
ttgcaggatctaaagtttgtaacatctgaggaaaagaagaagcaaggctttcagcgggaa
aacgaagtcttgctccagaggcgaaaggatgtggtccagcctggtgggaccaacctcagt
gtaacagtaccttacagggtgatagaccaacccctcaagcttgcgccccaagactgggat
cgagttgtggcagtatttgtgcagggtcctgcttggcagttcaagggctggccatgggtc
ctgcctgacgggtcacctgttgatatatttgcaaaaatcagagcattccacctcaagtat
gatgaggtaaaggtggatcccaacgtacagaagtgggatgtgacagtgttggaactaagc
catcacaaaaggcatttggacagacctattttcttgcgtttctgggagacactggacagg
tacatggtgaagcacaaatcccacttgagattctga
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