Polyodon spathula (Mississippi paddlefish): 121330832
Help
Entry
121330832 CDS
T07273
Name
(RefSeq) mesoderm induction early response protein 1-like isoform X1
KO
K28169
mesoderm induction early response protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121330832
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
121330832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELM2
MIER1_3_C
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121330832
NCBI-ProteinID:
XP_041133610
LinkDB
All DBs
Position
18:complement(32933461..32942821)
Genome browser
AA seq
530 aa
AA seq
DB search
MTYGLVLLDFQQFYKCFTCTFYFLLQPSGSLSPGGSAGSDDHEFDPSAEMLIHDYDDERT
LEEEELMERETNFRTEIEDLAREGDMPIQELLSLYGYRAGGSPEEEEDGEVEEEEEDEEE
LEDVDNDENSGSSGDMQGTKEEGVKDSSEQEDETQSSNDDQAQSVTSHDTSELICPQRCK
YFESNDAEEESEEDEDYIPSEDWKKEIMVGSMYQAETPSGLCKYKENQKVYENDDQLLWN
PEFVPEDKVVEFLTEASKRSGEEKGVEAVPEGCHIKDNEQALYELVKCNFDTEEALRRLR
FNVKAARDELSVWTEEECRNFEQGLKVYGKDFHLIQGNKVRTRSVGECVAFYYMWKKSER
YDFFAQQTRLGKRKYNLHPGVTDYMDRLLDETESAASSRAASPPPTTSNSSASHSERDDG
SNQNGIAAHDPAEALSCLNEVKTEGLLANGPASHTQECPPIEKDMNGYSKQDSLSDRECA
IVTEGNDNSKHEENYDKPTKRRRLDHNVASETDKPGTSAQETSSGLKSED
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacatacggcttagttttgttagattttcaacagttttacaagtgctttacttgtaca
ttttactttcttttacagccctctgggagtttgagcccaggaggttcagctggctcagat
gaccatgaattcgatccttctgcggagatgctgatacatgactatgatgatgagcggacg
ctggaggaagaagaactgatggaacgggaaaccaattttagaactgagattgaagatctt
gctcgggaaggtgatatgccgattcaggagctccttagtttgtatggctatagggctgga
ggatctcctgaggaagaggaggatggagaggtggaggaggaagaggaagatgaggaggag
ttggaggatgtggataatgacgagaatagtggtagcagtggggacatgcaggggactaag
gaggagggagttaaagattcttcagaacaagaggatgagactcagtcctccaacgatgac
caagcacaatctgtcacttcccatgatacatctgaattaatctgcccacaaagatgtaaa
tactttgaaagtaatgatgctgaagaagaatcagaagaggatgaagattatattccatct
gaagattggaaaaaagagatcatggttggctccatgtaccaggctgaaactccatctggc
ctttgcaaatataaagagaatcagaaagtgtatgagaacgatgaccaattactgtggaat
ccagaatttgtgcctgaagataaagtagtagagttcttgactgaagcttcaaaacgctct
ggtgaagaaaagggagttgaagctgttcctgaaggatgtcatatcaaggacaatgaacag
gcactgtatgagttggtaaagtgtaattttgatactgaagaagcactacgaagactaaga
tttaatgttaaagctgccagagacgaactgtcagtatggacagaggaagaatgtaggaat
tttgaacaaggactaaaggtatacggaaaagattttcacctgatccaagggaacaaggtg
agaactagatcagtaggagaatgtgtggccttttattacatgtggaagaaatctgagcgt
tatgatttctttgcacagcaaaccaggcttggaaaaaggaaatacaatcttcatcctggt
gtcacggattatatggaccgtctcctagatgaaacggaaagtgctgcatcaagtcgtgca
gcttctccaccccctactacctccaacagcagtgccagccattcagagagggacgatggc
agtaatcagaacggaatagctgctcatgacccagctgaagcattgtcctgtttgaatgaa
gttaaaactgaaggtttattggcaaatggaccagccagtcacacccaagaatgtcctcct
atagaaaaagacatgaatggctatagcaaacaggactccctgagcgatagagaatgtgct
attgtgactgaaggtaatgacaacagtaagcatgaggaaaactatgataaacctactaag
agaaggaggcttgaccataatgtcgccagtgagacggataaaccaggtacctctgcacaa
gagacaagttctggtctaaaatctgaagactaa
DBGET
integrated database retrieval system
